Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNRNP200O75643 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 FTLP19-201ENST00000433300 394 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 FABP3P2-201ENST00000453169 399 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AC091959.2-201ENST00000477363 321 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNRNP200O75643 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.82□□□□□ -1.8
SNRNP200O75643 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AL591424.2-201ENST00000617023 128 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.82□□□□□ -1.8
SNRNP200O75643 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNRNP200O75643 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 U8.11-201ENST00000384699 133 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 U8.12-201ENST00000384701 133 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AL445189.1-201ENST00000405722 338 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AL606490.8-201ENST00000441624 319 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.82□□□□□ -1.8
SNRNP200O75643 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 RPS4XP12-201ENST00000461747 709 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNRNP200O75643 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.82□□□□□ -1.8
SNRNP200O75643 AC005255.1-201ENST00000593748 216 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 AC068020.1-201ENST00000594215 661 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.82□□□□□ -1.8
SNRNP200O75643 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.82□□□□□ -1.8
SNRNP200O75643 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SNRNP200O75643 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 RHOT1P2-201ENST00000366423 333 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.81□□□□□ -1.8
SNRNP200O75643 RN7SKP199-201ENST00000410325 305 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.81□□□□□ -1.8
SNRNP200O75643 RPS3AP25-201ENST00000411660 793 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 OR6C64P-201ENST00000419708 825 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 OR4F13P-201ENST00000428478 931 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.81□□□□□ -1.8
SNRNP200O75643 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 RPL23AP12-201ENST00000467573 473 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 RPL21P6-201ENST00000479171 504 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 AC110792.1-201ENST00000491826 472 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.81□□□□□ -1.8
SNRNP200O75643 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.81□□□□□ -1.8
SNRNP200O75643 AC063950.1-201ENST00000552036 308 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 AL121772.2-201ENST00000614331 297 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
SNRNP200O75643 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.81□□□□□ -1.8
SNRNP200O75643 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNRNP200O75643 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 OR4A15-201ENST00000314706 1035 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 GSTM3P2-201ENST00000412746 530 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 PGBD4P8-201ENST00000412993 562 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 HMGB1P37-201ENST00000439613 609 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AC139783.2-201ENST00000504847 1145 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 NPM1P47-201ENST00000560843 856 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AGGF1P6-201ENST00000569213 976 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 RPL23AP87-202ENST00000573039 466 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms