Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL590139.1-201ENST00000416267 400 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL121878.1-201ENST00000418638 859 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AC016907.1-201ENST00000419483 435 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 MTND2P18-201ENST00000419962 1030 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 BX119904.4-201ENST00000424402 301 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AC008072.1-201ENST00000434254 824 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 PTGES3P1-201ENST00000439531 483 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL138878.2-201ENST00000440581 1241 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 RPL34P20-201ENST00000442771 351 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 IGHV5-78-201ENST00000450948 295 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.32□□□□□ -1.72
LMX1BO60663 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.32□□□□□ -1.72
LMX1BO60663 RPS4XP6-201ENST00000477670 797 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 ENPP7P9-201ENST00000514456 627 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 FTH1P11-201ENST00000517577 551 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.32□□□□□ -1.72
LMX1BO60663 AC069366.1-201ENST00000583159 838 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.32□□□□□ -1.72
LMX1BO60663 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMX1BO60663 SUMO2P14-201ENST00000604488 293 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 RNU6-84P-201ENST00000607737 102 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AL138478.1-201ENST00000612252 832 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 AC015871.5-202ENST00000623252 701 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.32□□□□□ -1.72
LMX1BO60663 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.32□□□□□ -1.72
LMX1BO60663 MIR3974-201ENST00000637126 96 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LMX1BO60663 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMX1BO60663 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.32□□□□□ -1.72
LMX1BO60663 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMX1BO60663 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMX1BO60663 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LMX1BO60663 AL672167.1-203ENST00000641299 2975 ntBASIC4.32□□□□□ -1.72
LMX1BO60663 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 NXF4-202ENST00000416098 1465 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMX1BO60663 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LMX1BO60663 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMX1BO60663 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMX1BO60663 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LMX1BO60663 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LMX1BO60663 Y_RNA.169-201ENST00000363745 96 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.31□□□□□ -1.72
LMX1BO60663 UBBP2-201ENST00000376781 231 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 RNU6-636P-201ENST00000384598 107 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMX1BO60663 ATP5HP3-201ENST00000396994 486 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AL136310.1-201ENST00000404926 654 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 HMGB1P49-201ENST00000418882 569 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 OR2AM1P-201ENST00000422137 422 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 NANOGP2-201ENST00000435391 727 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.31□□□□□ -1.72
LMX1BO60663 RPS29P9-201ENST00000440360 171 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.31□□□□□ -1.72
LMX1BO60663 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.31□□□□□ -1.72
LMX1BO60663 RSL24D1P3-201ENST00000449255 495 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 ART2BP-201ENST00000453501 499 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 RPS6P2-201ENST00000454208 705 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AL445669.2-201ENST00000454425 421 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 GTF2IP12-201ENST00000456547 356 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMX1BO60663 BET1P1-201ENST00000482276 359 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 HMGN2P25-201ENST00000486956 268 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 RN7SL244P-201ENST00000493405 297 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 RN7SL591P-201ENST00000496150 292 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC091435.1-201ENST00000505442 584 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.31□□□□□ -1.72
LMX1BO60663 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.31□□□□□ -1.72
LMX1BO60663 MTCO1P47-201ENST00000523889 1271 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 NDUFS5P6-201ENST00000529136 295 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC008033.2-201ENST00000542626 177 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC125611.1-201ENST00000549563 229 ntBASIC4.31□□□□□ -1.72
LMX1BO60663 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms