Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC067838.1-201ENST00000606064 577 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AC090948.1-201ENST00000607464 549 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AL136295.6-201ENST00000610486 658 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AL161616.1-201ENST00000611867 286 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AP003497.2-201ENST00000624220 967 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 AL356121.2-201ENST00000624715 780 ntBASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM49D1C9J1S8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 MTND3P20-201ENST00000407663 186 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 USP9YP19-201ENST00000412165 485 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 P2RY10P2-201ENST00000416730 913 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC019050.1-201ENST00000418508 492 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC069213.2-201ENST00000420238 366 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 HMGB3P10-201ENST00000434734 572 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 RPL23AP46-201ENST00000438548 490 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL356535.1-201ENST00000440335 398 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 MTND3P4-201ENST00000453537 303 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC007686.1-201ENST00000488511 463 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 RN7SL691P-201ENST00000494487 301 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 KRT19P6-201ENST00000510983 209 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 RNU7-143P-201ENST00000516781 65 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AF186190.1-201ENST00000517470 480 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL360157.1-201ENST00000565962 87 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC022655.2-201ENST00000577280 318 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC012417.1-201ENST00000582307 1039 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 FAM27D1-201ENST00000612308 341 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL359715.5-201ENST00000623431 443 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM49D1C9J1S8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 CYB5AP4-201ENST00000396692 399 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC092570.3-201ENST00000420113 693 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 BTBD7P2-201ENST00000441962 620 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AL513533.1-201ENST00000453728 415 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AL133477.1-201ENST00000457472 514 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC089999.1-201ENST00000460336 374 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AP002371.1-201ENST00000463604 433 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 RPL35P6-201ENST00000490024 372 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC010476.1-201ENST00000519111 851 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 OR7E10P-201ENST00000526420 991 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC105233.3-201ENST00000531125 744 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC107918.3-201ENST00000533272 382 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AP006289.1-201ENST00000538089 277 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms