Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL645608.4-201ENST00000423619 154 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL935212.3-201ENST00000450729 284 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 CABYRP1-201ENST00000465493 1045 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 RPL21P71-201ENST00000465598 459 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC139783.2-201ENST00000504847 1145 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC091868.1-201ENST00000508746 304 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 PARP4P3-201ENST00000510265 317 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 SNORA31.13-201ENST00000516624 135 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC063949.1-201ENST00000552900 865 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC106785.3-201ENST00000564064 847 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC103792.1-201ENST00000603591 919 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MEMO1P5-201ENST00000604810 406 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL512329.2-201ENST00000607350 548 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC004775.1-201ENST00000607389 753 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AP002360.3-201ENST00000607673 710 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 EIF3FP1-201ENST00000613970 806 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC010435.1-201ENST00000623353 1177 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 CR392039.4-201ENST00000624968 501 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 NCLP2-201ENST00000416078 1462 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 ZNF90P1-201ENST00000480493 1951 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC016588.2-201ENST00000632484 3021 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AC135352.1-201ENST00000506173 1418 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
KCNIP3Q9Y2W7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.78□□□□□ -1.81
KCNIP3Q9Y2W7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RNU1-63P-201ENST00000383902 164 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL031985.1-201ENST00000392713 418 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RPS23P10-201ENST00000416185 486 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MTCO3P4-201ENST00000419236 787 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RPL7P53-201ENST00000421245 739 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 FTH1P6-201ENST00000430768 320 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL035458.1-201ENST00000433096 585 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 ZFAND6P1-201ENST00000434138 605 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 CEACAMP1-201ENST00000434624 1035 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL391987.1-201ENST00000441025 200 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MYO5BP2-201ENST00000449815 1277 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RPL7P31-201ENST00000450192 724 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL606490.1-201ENST00000452266 765 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RPS20P4-201ENST00000461659 355 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC110749.1-201ENST00000462007 357 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 RN7SL717P-201ENST00000478343 297 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 IGLV2-34-201ENST00000490007 283 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC024558.1-201ENST00000505008 528 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 IFITM8P-201ENST00000522529 394 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 OR5AN2P-201ENST00000534535 896 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms