Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RLIMP2-201ENST00000427891 1563 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.87□□□□□ -1.63
SIX4Q9UIU6 UGT2B26P-201ENST00000508672 1613 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL672167.2-201ENST00000377164 879 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 RNU6-468P-201ENST00000384003 109 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 RNU6-1005P-201ENST00000384519 107 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 RN7SKP199-201ENST00000410325 305 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 MTCYBP7-201ENST00000419540 1134 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 CNOT7P1-201ENST00000429006 852 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 TPTE2P3-201ENST00000441562 1189 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL009048.1-201ENST00000450437 298 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 HMGB1P26-201ENST00000452520 628 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 CYCSP34-201ENST00000458172 304 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC025674.1-201ENST00000507074 324 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC138938.1-201ENST00000515431 782 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 RPS27AP18-201ENST00000515536 459 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC118942.1-201ENST00000529674 1035 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AC068313.1-201ENST00000604028 1008 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 MIR6891-201ENST00000618788 93 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL078595.3-201ENST00000623815 1166 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 AL590396.4-201ENST00000636779 956 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 OR6C71P-202ENST00000641886 1107 ntBASIC4.86□□□□□ -1.63
SIX4Q9UIU6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX4Q9UIU6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC093591.2-201ENST00000565254 3843 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC083843.2-201ENST00000568248 6253 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC126755.2-208ENST00000327792 462 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC138969.1-213ENST00000331436 462 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RNU5E-10P-201ENST00000363506 118 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RNU1-130P-201ENST00000363930 160 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 U3.22-201ENST00000391120 215 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 MIR921-201ENST00000401133 56 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 HMGB3P19-201ENST00000403971 560 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 ELOCP19-201ENST00000411919 318 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 FAR2P2-201ENST00000413041 594 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 BTF3P9-201ENST00000418784 283 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC241520.1-201ENST00000422654 1099 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 FAR2P4-202ENST00000425399 584 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RPL21P91-201ENST00000429231 479 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC068287.1-201ENST00000430283 295 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC044797.1-201ENST00000445744 679 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC098826.2-201ENST00000452011 651 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AL591473.1-201ENST00000464297 313 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC112206.1-201ENST00000468416 477 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 RPL21P126-201ENST00000470049 478 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 AC006463.2-201ENST00000473326 348 ntBASIC4.85□□□□□ -1.63
SIX4Q9UIU6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX4Q9UIU6 SYT14P1-201ENST00000481459 721 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms