Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 OR52E6-202ENST00000379946 954 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC119751.3-201ENST00000399720 670 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 RPS16P5-201ENST00000406501 404 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC114755.2-201ENST00000413520 361 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 KRR1P1-201ENST00000419430 803 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AL929288.2-201ENST00000446368 407 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC005002.1-201ENST00000447458 540 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC112492.1-201ENST00000449607 712 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 CEACAMP6-201ENST00000452007 574 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC010326.1-201ENST00000462726 602 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC006463.2-201ENST00000473326 348 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC091868.1-201ENST00000508746 304 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC026782.2-201ENST00000510845 636 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 IGKV1-32-201ENST00000519290 311 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 NPM1P47-201ENST00000560843 856 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC018552.1-201ENST00000562099 811 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 MTND3P13-201ENST00000574391 343 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 RN7SL690P-201ENST00000582087 240 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC002069.2-201ENST00000603580 883 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 BNIP3P4-201ENST00000604946 565 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AL445423.1-201ENST00000609941 536 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC009237.15-201ENST00000610252 501 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC013470.4-201ENST00000619978 986 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 AC074140.1-201ENST00000621617 208 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 MIR6810-201ENST00000622701 70 ntBASIC5.51□□□□□ -1.53
COL20A1Q9P218 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
COL20A1Q9P218 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL20A1Q9P218 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC009643.2-201ENST00000603543 1448 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC126755.2-208ENST00000327792 462 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC138969.1-213ENST00000331436 462 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 Y_RNA.472-201ENST00000384322 102 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 MIR141-201ENST00000384975 95 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 GLULP6-201ENST00000399502 913 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 RPL21P67-201ENST00000402896 478 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 FCF1P5-201ENST00000406490 482 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 OR5M12P-201ENST00000423388 929 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC010099.3-201ENST00000423896 409 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 RPF2P1-201ENST00000424137 906 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 NIPA2P1-201ENST00000426223 976 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 HIGD1AP12-201ENST00000427832 281 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AP001324.1-201ENST00000428553 399 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 HIGD1AP4-201ENST00000430194 280 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC004022.1-201ENST00000447766 1066 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 RPS5P7-201ENST00000456664 608 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC005410.1-202ENST00000460347 485 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC005351.1-201ENST00000511152 786 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.5□□□□□ -1.53
COL20A1Q9P218 AC018442.3-201ENST00000523025 183 ntBASIC5.5□□□□□ -1.53
COL20A1Q9P218 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms