Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 ELOCP34-201ENST00000604436 327 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AL137246.1-201ENST00000607072 977 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AC015813.4-201ENST00000610469 179 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AL356274.1-201ENST00000617064 410 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 RN7SL722P-201ENST00000617780 284 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 RN7SL565P-201ENST00000618246 284 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 AC097504.1-201ENST00000515103 2415 ntBASIC4.2□□□□□ -1.74
TREX1Q9NSU2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
TREX1Q9NSU2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC007390.2-201ENST00000606229 3803 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AL592437.2-201ENST00000421655 2434 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 RNA5SP509-201ENST00000364577 119 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 U3.22-201ENST00000391120 215 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AP000357.1-201ENST00000409926 1165 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC245028.1-201ENST00000423259 256 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC023141.6-201ENST00000429418 337 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 CYCSP42-201ENST00000450823 238 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC009963.2-201ENST00000453431 138 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 RPS20P4-201ENST00000461659 355 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC011276.1-201ENST00000469688 323 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC109327.1-201ENST00000471666 403 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC041039.1-201ENST00000485656 536 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 NPM1P52-201ENST00000518264 846 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 UBTFL9-201ENST00000534504 1148 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 MIR4330-201ENST00000579077 105 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AL161729.3-201ENST00000603533 673 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC008745.1-201ENST00000604064 271 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AL121873.1-201ENST00000616013 524 ntBASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
TREX1Q9NSU2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AL133243.3-201ENST00000617415 3004 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AC018529.3-201ENST00000624212 2254 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 OR4K17-201ENST00000315543 1032 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AC092013.1-201ENST00000438795 332 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 ELOCP8-201ENST00000439309 332 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 ELOCP15-201ENST00000442090 332 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 RNA5SP246-201ENST00000458909 119 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 RN7SL738P-201ENST00000470264 297 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 OR51K1P-201ENST00000510214 950 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 KCTD9P2-201ENST00000512203 1013 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 OR6R2P-201ENST00000609216 300 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AP005264.7-201ENST00000625003 745 ntBASIC4.18□□□□□ -1.74
TREX1Q9NSU2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
TREX1Q9NSU2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms