Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC103591.2-201ENST00000265259 766 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 MIR133A2-201ENST00000347538 102 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 RNU5D-1-201ENST00000363299 116 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 SNORA72.1-201ENST00000363485 129 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 RNU6-501P-201ENST00000364072 100 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC087752.1-201ENST00000391360 558 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 GAPDHP49-201ENST00000421421 961 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC138761.5-201ENST00000433967 325 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 NPM1P18-201ENST00000434232 732 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 MTATP6P30-201ENST00000443540 664 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 TRIM60P16-201ENST00000444048 694 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 MTCO1P48-201ENST00000448024 1096 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AP000542.1-201ENST00000448473 371 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 COX6CP18-201ENST00000448769 222 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 MTND6P6-201ENST00000478031 263 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC023424.2-201ENST00000493479 777 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC098799.2-201ENST00000509466 868 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC008802.1-201ENST00000519121 791 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC124947.2-202ENST00000552735 133 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 PSMB7P1-201ENST00000556349 514 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC020914.6-201ENST00000594327 272 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 uc_338.26-201ENST00000612659 160 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 OR52B5P-202ENST00000641118 1110 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 AC135352.1-201ENST00000506173 1418 ntBASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXP3Q9BZS1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC011447.7-201ENST00000624228 1590 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL590763.1-201ENST00000398297 1545 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 snosnR66.1-201ENST00000391095 99 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 FGF7P8-201ENST00000402994 292 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 CIR1P3-201ENST00000405137 479 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 SNORA11C-201ENST00000408532 129 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 RNU2-42P-201ENST00000410697 113 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL009174.1-201ENST00000426577 416 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC104843.2-201ENST00000427666 297 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 RPS27AP6-201ENST00000427962 448 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL365184.2-201ENST00000431139 435 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL662791.1-201ENST00000441992 928 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms