Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 MIR5697-201ENST00000578045 78 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC009237.13-201ENST00000603193 276 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC107304.1-201ENST00000604229 296 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC112191.3-201ENST00000604371 277 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL359999.1-201ENST00000604513 294 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC009237.12-201ENST00000604755 742 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC092266.1-201ENST00000610958 165 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC037198.3-201ENST00000616754 526 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 MRPL57P1-201ENST00000621486 265 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC027575.3-201ENST00000583058 2747 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 GNL2P1-201ENST00000451274 2190 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 RNU6-348P-201ENST00000384386 107 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC004386.1-201ENST00000393214 761 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 RN7SKP121-201ENST00000410842 305 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 RPS7P14-201ENST00000426405 583 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 OR4F13P-201ENST00000428478 931 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 RPL7P36-201ENST00000444633 681 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC005297.2-201ENST00000450430 606 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 HIGD1AP16-201ENST00000450986 258 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 PPIAP27-201ENST00000453800 265 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 TPT1P7-201ENST00000458300 517 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC094085.1-201ENST00000468914 584 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CR383656.1-201ENST00000484916 377 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC093267.1-201ENST00000489176 961 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC010343.2-201ENST00000510162 224 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC084757.1-201ENST00000559987 490 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 MRPS21P8-201ENST00000569196 235 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AL121834.1-201ENST00000572284 509 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC008507.3-201ENST00000585753 472 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AP001823.1-201ENST00000604056 1003 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC025588.3-201ENST00000604182 274 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 COX6CP4-201ENST00000605798 228 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC108747.1-201ENST00000609508 535 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC131902.3-201ENST00000611767 581 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC009237.17-201ENST00000618111 748 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 TCL6_3.1-201ENST00000619064 137 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 FAM27E2-201ENST00000619668 403 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AC004009.2-201ENST00000623016 728 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 MIR4496-201ENST00000635896 61 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 AOX3P-204ENST00000491025 2107 ntBASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRAIPQ9BWF2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms