Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL603766.1-201ENST00000407763 664 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 MIR1182-201ENST00000408363 97 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC009237.10-201ENST00000414112 510 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 BX664727.1-201ENST00000416024 466 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC093422.3-201ENST00000428506 305 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AL512637.2-201ENST00000431287 1256 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC023347.2-201ENST00000433994 462 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 MRPL35P2-201ENST00000448009 511 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC010469.1-201ENST00000463864 576 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC097484.1-201ENST00000471148 389 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AP000926.1-201ENST00000479573 241 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 RN7SL826P-201ENST00000479724 288 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX3Q99909 RPL7P41-201ENST00000485823 957 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AL035404.1-201ENST00000497982 568 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC016550.1-201ENST00000505348 785 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC090071.1-201ENST00000507713 644 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC004980.4-201ENST00000513375 203 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC006427.1-201ENST00000514359 712 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 RN7SKP260-201ENST00000516907 149 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 C1DP5-201ENST00000525775 383 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AP000916.1-201ENST00000533869 835 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX3Q99909 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 MIR4646-201ENST00000580775 63 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX3Q99909 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 AP003117.2-201ENST00000606010 545 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC113194.1-201ENST00000606037 500 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX3Q99909 OR2BH1P-201ENST00000608850 864 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC118658.2-201ENST00000618697 459 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX3Q99909 AC132825.7-201ENST00000638744 335 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX3Q99909 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSX3Q99909 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX3Q99909 THAP12P4-201ENST00000528321 2266 ntBASIC4.18□□□□□ -1.74
SSX3Q99909 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX3Q99909 AC022031.1-201ENST00000585985 2593 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX3Q99909 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 OR9G4-201ENST00000302957 984 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 MIR448-201ENST00000362131 111 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 NUDT19P3-201ENST00000404698 555 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 RN7SKP177-201ENST00000410567 355 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 AL160275.2-201ENST00000412010 394 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 EI24P4-201ENST00000423683 1078 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 RPL12P3-201ENST00000440080 396 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 ARL4AP3-201ENST00000441452 574 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX3Q99909 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 RPL37P6-202ENST00000464216 403 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 BX284632.1-201ENST00000478218 541 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX3Q99909 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 HMGN1P15-201ENST00000513870 295 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 RN7SKP283-201ENST00000517197 270 ntBASIC4.17□□□□□ -1.74
SSX3Q99909 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX3Q99909 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX3Q99909 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX3Q99909 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms