Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC146944.2-203ENST00000502493 354 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC139495.1-202ENST00000513164 354 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 RNU6-943P-201ENST00000516960 98 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC105233.3-201ENST00000531125 744 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 TRAV8-5-201ENST00000537369 341 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AL360157.1-201ENST00000565962 87 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC022655.2-201ENST00000577280 318 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AL049539.1-201ENST00000611964 459 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AL035461.2-201ENST00000619201 524 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 AC015908.5-201ENST00000623289 343 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 AP003497.2-201ENST00000624220 967 ntBASIC4.41□□□□□ -1.7
CCDC42Q96M95 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC42Q96M95 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC42Q96M95 BDP1P-201ENST00000582658 1990 ntBASIC4.4□□□□□ -1.7
CCDC42Q96M95 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC42Q96M95 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC42Q96M95 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC42Q96M95 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC42Q96M95 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 ZNF603P-201ENST00000405613 487 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 CYP4F29P-201ENST00000420685 446 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC006455.6-201ENST00000426192 893 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 RPL12P28-201ENST00000430852 489 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 HMGB3P10-201ENST00000434734 572 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 RPL23AP71-201ENST00000470966 469 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 RN7SL826P-201ENST00000479724 288 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 RPL29P14-201ENST00000495837 428 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 HPRT1P2-201ENST00000505250 544 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC111000.3-201ENST00000508057 576 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC42Q96M95 MTND1P6-201ENST00000523621 946 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC090819.1-201ENST00000523800 1111 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 MRPS35P3-201ENST00000603189 709 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC013244.1-201ENST00000604279 193 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AL451044.1-201ENST00000604867 238 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 MIR6715B-201ENST00000637172 77 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
CCDC42Q96M95 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC42Q96M95 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AL133412.1-201ENST00000380194 2992 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC42Q96M95 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AL132640.2-201ENST00000559968 1698 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC42Q96M95 SNORD35B-201ENST00000363660 87 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 RN7SKP103-201ENST00000363848 320 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC42Q96M95 RN7SKP56-201ENST00000410513 331 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC234779.1-201ENST00000425910 285 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 ATP5HP2-201ENST00000433885 485 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 RPL7P28-201ENST00000437739 740 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 YWHAQP9-201ENST00000445891 512 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 RPL32P9-201ENST00000487963 407 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 RPL23AP72-201ENST00000492447 435 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AK3P4-201ENST00000504283 583 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC008958.1-201ENST00000511047 682 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 VTA1P2-201ENST00000520205 911 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 TVP23BP1-201ENST00000557500 617 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC42Q96M95 AC020915.5-201ENST00000596836 964 ntBASIC4.39□□□□□ -1.71
CCDC42Q96M95 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms