Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AP002802.2-201ENST00000605877 235 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC108751.5-201ENST00000492880 1336 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC234772.1-201ENST00000377927 937 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 RNU6-398P-201ENST00000384143 109 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 RNU2-50P-201ENST00000410494 143 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 RSU1P3-201ENST00000412878 835 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AL591848.1-201ENST00000413092 322 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 MTATP6P20-201ENST00000414147 562 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 SETP9-201ENST00000423837 832 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 OR2B7P-201ENST00000429302 934 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 MTCO1P43-201ENST00000431831 488 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AL513533.1-201ENST00000453728 415 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTP4Q96DX8 RPS17P11-201ENST00000474297 293 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 RPL23AP65-201ENST00000475608 468 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 RN7SL817P-201ENST00000480777 288 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC113420.1-201ENST00000507903 571 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC023824.3-201ENST00000569003 562 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC091042.1-201ENST00000579213 173 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC013444.2-201ENST00000603317 787 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC091979.2-201ENST00000607514 214 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AP000346.3-201ENST00000622821 210 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTP4Q96DX8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 AC068870.3-201ENST00000625077 2536 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 AL355852.1-201ENST00000454081 1771 ntBASIC4.78□□□□□ -1.64
RTP4Q96DX8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTP4Q96DX8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP4Q96DX8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC008432.1-201ENST00000615912 1320 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC105074.1-201ENST00000623380 3095 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 MFSD8-216ENST00000641147 4009 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 MIR195-201ENST00000385194 87 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 SNORD65-201ENST00000391079 73 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 RNA5SP113-201ENST00000410486 84 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 CEACAMP8-201ENST00000413902 580 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC004448.2-201ENST00000422360 586 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 H2AFZP5-201ENST00000446960 382 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC073264.2-201ENST00000448886 166 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 RPL36AP41-201ENST00000493820 306 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 RN7SKP34-201ENST00000516142 244 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms