Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 OR5BC1P-201ENST00000529327 739 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 CD24P2-201ENST00000565486 219 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 RN7SL690P-201ENST00000582087 240 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC068790.4-201ENST00000602474 263 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AL021997.2-201ENST00000615674 271 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC015722.2-201ENST00000622210 551 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 BDP1P-201ENST00000582658 1990 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 HSPA8P17-201ENST00000427029 1382 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC010928.1-201ENST00000592477 1447 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AL512430.2-201ENST00000406786 339 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC016712.1-201ENST00000431088 378 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC011742.1-201ENST00000431448 434 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AL162591.2-201ENST00000449634 317 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC239809.1-201ENST00000450470 217 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AK3P4-201ENST00000504283 583 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC034205.1-201ENST00000520621 638 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AP000827.1-201ENST00000527814 258 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC009643.1-201ENST00000532030 391 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC020915.5-201ENST00000596836 964 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AP003392.5-201ENST00000607857 415 ntBASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC112Q8NEF3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 RN7SKP106-201ENST00000410832 272 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC106901.1-201ENST00000425086 698 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 CYCSP42-201ENST00000450823 238 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 FTH1P2-201ENST00000466086 412 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC053481.1-201ENST00000467217 306 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 IGKV2-38-201ENST00000517443 247 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC063950.1-201ENST00000552036 308 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC122134.1-201ENST00000565664 1104 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC021483.2-201ENST00000567415 758 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC093765.1-201ENST00000603758 881 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AC092162.3-201ENST00000624511 1624 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 AL356317.1-201ENST00000396110 1436 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 DHX40P1-201ENST00000588725 1412 ntBASIC4.63□□□□□ -1.67
CCDC112Q8NEF3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 MAPK10-373ENST00000641983 6772 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 RNA5SP175-201ENST00000364275 119 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 RNA5SP397-201ENST00000391323 118 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AL138878.1-201ENST00000405131 347 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 RPL18P10-201ENST00000425606 538 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 ATP5HP2-201ENST00000433885 485 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 NPM1P48-201ENST00000436002 853 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.62□□□□□ -1.67
CCDC112Q8NEF3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms