Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC009951.1-201ENST00000623674 2614 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 RN7SKP104-201ENST00000362605 328 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 RNA5SP123-201ENST00000363244 119 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 RNU6-236P-201ENST00000363886 106 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 SNORA74A-201ENST00000364089 198 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ALFQ53S48 TMSB4XP8-201ENST00000402089 135 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AL589647.1-201ENST00000402485 466 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 RN7SKP16-201ENST00000410180 299 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 TMSB4XP6-201ENST00000415187 135 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 RPS15AP40-201ENST00000419621 391 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 TMSB4XP1-201ENST00000424567 135 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 COX6CP13-201ENST00000428703 226 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC091180.1-201ENST00000462104 372 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 RN7SL244P-201ENST00000493405 297 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 AC118282.2-201ENST00000508739 374 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 KRT19P6-201ENST00000510983 209 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 LSM3P2-201ENST00000551246 273 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 ZNF971P-201ENST00000562068 1249 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC097504.2-201ENST00000608088 454 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AF129408.1-201ENST00000608767 431 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 FAM157B-203ENST00000639350 358 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 AC138393.1-206ENST00000540997 1886 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ALFQ53S48 DCAF13P3-201ENST00000561147 1334 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 AL627171.1-201ENST00000618845 1308 ntBASIC5.19□□□□□ -1.58
ALFQ53S48 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
ALFQ53S48 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ALFQ53S48 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.18□□□□□ -1.58
ALFQ53S48 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.18□□□□□ -1.58
ALFQ53S48 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.18□□□□□ -1.58
ALFQ53S48 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ALFQ53S48 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AL109941.1-201ENST00000401925 229 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AL078599.1-201ENST00000402075 293 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 LIPT1P1-201ENST00000415870 1186 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.18□□□□□ -1.58
ALFQ53S48 ELOCP6-201ENST00000429066 328 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.18□□□□□ -1.58
ALFQ53S48 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.18□□□□□ -1.58
ALFQ53S48 RAB11AP1-201ENST00000442978 646 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ALFQ53S48 AL354714.3-201ENST00000447284 493 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 RPS27AP15-201ENST00000447672 466 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 MRPL35P2-201ENST00000448009 511 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.18□□□□□ -1.58
ALFQ53S48 ELOCP12-201ENST00000458706 328 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 snoU13.20-201ENST00000459180 104 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 RN7SL826P-201ENST00000479724 288 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.18□□□□□ -1.58
ALFQ53S48 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.18□□□□□ -1.58
ALFQ53S48 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.18□□□□□ -1.58
ALFQ53S48 AC104417.1-201ENST00000523974 751 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.18□□□□□ -1.58
ALFQ53S48 NMNAT1P1-201ENST00000554095 876 ntBASIC5.18□□□□□ -1.58
ALFQ53S48 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms