Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 BOLA3P4-201ENST00000418151 400 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC090960.1-201ENST00000421072 306 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 RPS26P47-201ENST00000427219 348 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AL353597.2-202ENST00000434901 373 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AL359265.1-201ENST00000440296 795 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 FAR2P1-206ENST00000449736 709 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AL122001.1-201ENST00000457027 370 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 NF1P3-201ENST00000457709 450 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 RPS23P1-201ENST00000491662 432 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 ARL2BPP5-201ENST00000523141 481 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC010487.1-201ENST00000594408 1172 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC005252.1-201ENST00000604518 1063 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC005294.1-201ENST00000355509 281 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC098592.1-201ENST00000419352 333 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 PTP4A1P5-201ENST00000420305 455 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AL133325.1-201ENST00000421090 382 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 NDUFB4P8-201ENST00000435351 367 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RPS15AP1-201ENST00000457423 391 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RPSAP50-201ENST00000481955 852 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RPS7P6-201ENST00000485777 579 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC025674.1-201ENST00000507074 324 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 SNORA70.11-201ENST00000515987 138 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 SNORA70.13-201ENST00000516116 138 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RNA5SP228-201ENST00000516232 133 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 RN7SKP31-201ENST00000516354 278 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 IGLV3-24-201ENST00000517477 197 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC027309.2-201ENST00000520566 192 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 OR5AZ1P-201ENST00000527448 943 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 UBE2NP1-201ENST00000545592 458 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC110743.1-201ENST00000584870 478 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 MIR4999-201ENST00000585029 91 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC008687.2-201ENST00000597865 520 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC106791.2-201ENST00000604680 391 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC025574.2-201ENST00000615621 514 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AP003072.4-201ENST00000624580 310 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AP003399.1-201ENST00000637534 361 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 CDR1-202ENST00000625883 1485 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AL451142.2-201ENST00000429076 2090 ntBASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms