Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC016559.2-201ENST00000510759 359 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RNA5SP373-201ENST00000517271 95 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC027369.5-201ENST00000533838 755 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 NMNAT1P5-201ENST00000559657 841 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 NPM1P47-201ENST00000560843 856 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MTCYBP33-201ENST00000575007 1130 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MIR3691-201ENST00000578066 90 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC119501.1-201ENST00000603646 475 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC009597.2-201ENST00000604659 592 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC011626.1-201ENST00000604710 562 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC012557.2-201ENST00000605919 418 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL451049.1-201ENST00000608672 497 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC016717.3-201ENST00000624730 554 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC074101.1-201ENST00000637861 241 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL450345.1-202ENST00000605741 3881 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RNF6P1-201ENST00000444889 1784 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC073136.1-201ENST00000449426 2884 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC133552.1-201ENST00000569988 4007 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 ECM1P2-201ENST00000503354 1577 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC097461.1-201ENST00000568928 2821 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC023421.1-201ENST00000590535 1785 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 RNU1-146P-201ENST00000364015 165 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 RNU1-43P-201ENST00000365052 165 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 RNU6-317P-201ENST00000384031 107 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 MIR589-201ENST00000385238 99 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 MIR1302-8-201ENST00000408342 128 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC114814.2-201ENST00000419195 485 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 PAICSP7-201ENST00000419829 962 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC005345.1-201ENST00000431868 217 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC092809.1-201ENST00000441469 474 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 RPS7P5-201ENST00000441482 581 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 MTCO2P25-201ENST00000447065 681 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 RPL5P24-201ENST00000463742 885 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC073358.1-201ENST00000505671 684 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 EIF3KP3-201ENST00000514461 639 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC090819.1-201ENST00000523800 1111 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 OR8A2P-201ENST00000528631 952 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 MTCYBP13-201ENST00000578634 1093 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 BPTFP1-201ENST00000579209 492 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AL445222.1-201ENST00000607259 628 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC245008.1-201ENST00000608123 476 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AL121612.2-201ENST00000612261 482 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC023158.2-201ENST00000614876 543 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC090246.1-201ENST00000616499 426 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC091932.2-201ENST00000623014 291 ntBASIC5.12□□□□□ -1.59
PTCHD3Q3KNS1 AC006840.1-201ENST00000623069 542 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms