Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-1322P-201ENST00000364309 107 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 Y_RNA.326-201ENST00000365176 113 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 RNU6-657P-201ENST00000383904 107 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 RN7SKP205-201ENST00000410999 307 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC017078.1-201ENST00000416146 368 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 AL353193.1-201ENST00000421444 268 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL445669.1-201ENST00000426743 755 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 RPEP2-201ENST00000432149 701 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 TAAR7P-201ENST00000436141 242 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 RPL7P54-201ENST00000438336 674 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC083855.1-201ENST00000440041 258 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC234771.4-201ENST00000441416 730 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH1Q08174 PPIAP32-201ENST00000449940 472 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 RPL7AP52-201ENST00000458096 790 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 RNU6-420P-201ENST00000458780 107 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 RN7SL165P-201ENST00000477476 291 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AC009567.2-201ENST00000502989 349 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC114967.1-201ENST00000504890 259 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 MRPS5P3-201ENST00000515577 166 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 RNU6-445P-201ENST00000516949 107 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AP003072.1-201ENST00000531740 145 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 NANOGNBP2-201ENST00000544753 553 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AC034268.2-201ENST00000571784 482 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AL161734.1-201ENST00000609720 557 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL132765.2-201ENST00000610812 351 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH1Q08174 MRPL57P1-201ENST00000621486 265 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AL160413.1-201ENST00000622780 310 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
PCDH1Q08174 BRAFP1-201ENST00000445336 2703 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 AC092692.1-201ENST00000623625 2595 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 AC009779.8-201ENST00000641684 4384 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.2□□□□□ -1.42
PCDH1Q08174 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDH1Q08174 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH1Q08174 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 FRG1BP-201ENST00000278882 761 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDH1Q08174 OR9K1P-201ENST00000326513 941 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 FRG1CP-201ENST00000358464 769 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AL034417.1-201ENST00000399343 800 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 MTND3P17-201ENST00000416968 344 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC006509.1-201ENST00000420788 634 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC233981.1-201ENST00000423224 461 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 RPL7P57-201ENST00000423238 740 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 GTF2IP20-201ENST00000431663 360 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 RBMY2TP-201ENST00000451162 947 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 RPL23AP12-201ENST00000467573 473 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 RPL12P31-201ENST00000478433 450 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 RPL36AP51-201ENST00000487216 318 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC022206.1-201ENST00000495947 347 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms