Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC064801.1-201ENST00000612025 407 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 MIR7702-201ENST00000621931 59 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AP000346.3-201ENST00000622821 210 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AL445363.3-201ENST00000623080 671 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 MIR6715B-201ENST00000637172 77 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AL049555.1-201ENST00000562834 1933 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HIST1H3AP68431 CYP1D1P-201ENST00000416662 1433 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 RNU1-14P-201ENST00000362759 152 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 NRBF2P2-201ENST00000413087 861 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 P2RY10P2-201ENST00000416730 913 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 MFSD13B-201ENST00000420133 1290 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 ELOCP10-201ENST00000440624 327 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 Z95152.1-201ENST00000453556 656 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 RPL7P32-201ENST00000457119 744 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 snoU13.1-201ENST00000459157 104 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 RN7SL585P-201ENST00000470538 280 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 HNRNPKP5-201ENST00000515300 253 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC027176.2-201ENST00000559166 746 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 ELOCP28-201ENST00000590044 317 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 ELOCP34-201ENST00000604436 327 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 LINC02471-203ENST00000641941 4752 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H3AP68431 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 AC097504.1-201ENST00000515103 2415 ntBASIC3.71□□□□□ -1.82
HIST1H3AP68431 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H3AP68431 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H3AP68431 IQCB2P-201ENST00000401788 1633 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL158163.1-201ENST00000603915 1649 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 RNU6-146P-201ENST00000384602 108 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 RNU6-603P-201ENST00000411403 107 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL391219.1-201ENST00000422570 483 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC245028.1-201ENST00000423259 256 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL732292.1-201ENST00000426692 226 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 RPL23AP89-201ENST00000439324 255 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 EEF1A1P1-201ENST00000447052 739 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 RAD23BP3-201ENST00000454157 1152 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 RPS20P4-201ENST00000461659 355 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC006517.1-201ENST00000480485 328 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 SYT14P1-201ENST00000481459 721 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC083829.1-201ENST00000503756 657 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC017037.1-201ENST00000508460 471 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 RNA5SP49-201ENST00000516450 115 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 IGLVIV-53-201ENST00000520107 367 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 HNRNPCP4-201ENST00000571636 900 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 MIR5096-201ENST00000583713 70 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 GMCL1P2-201ENST00000605230 823 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC078899.5-201ENST00000612475 178 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC116447.1-201ENST00000613153 453 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 AC073342.3-201ENST00000624211 193 ntBASIC3.7□□□□□ -1.82
HIST1H3AP68431 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H3AP68431 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H3AP68431 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H3AP68431 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H3AP68431 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms