Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 ZFRP1-201ENST00000457579 2970 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC023141.12-201ENST00000512399 199 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AP004242.1-201ENST00000533701 349 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC015849.6-201ENST00000605454 474 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC093799.2-201ENST00000610062 578 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 FAM27B-201ENST00000610601 213 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 MIR486-1-201ENST00000612171 68 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC026124.2-201ENST00000621847 656 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC091905.2-201ENST00000623143 306 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CKS1BP61024 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.12□□□□□ -1.91
CKS1BP61024 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CKS1BP61024 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.12□□□□□ -1.91
CKS1BP61024 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CKS1BP61024 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CKS1BP61024 RNU1-82P-201ENST00000390851 165 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 MIR1282-201ENST00000408865 101 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.11□□□□□ -1.91
CKS1BP61024 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 UBE2V2P1-201ENST00000434717 398 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC245047.2-201ENST00000441060 530 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 EIF2S2P2-201ENST00000447161 982 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 HMGB3P8-201ENST00000449709 577 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 RPL12P26-201ENST00000452430 487 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 RPL23AP56-201ENST00000460778 453 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC072052.1-201ENST00000496556 306 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC023050.1-201ENST00000498198 304 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC004980.4-201ENST00000513375 203 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 IGKV2-18-201ENST00000522607 343 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC015912.2-201ENST00000571053 181 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.11□□□□□ -1.91
CKS1BP61024 MIR3614-201ENST00000581261 86 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 AC022726.1-201ENST00000587475 207 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 AC007497.1-201ENST00000610421 561 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 MFSD8-242ENST00000641690 4199 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 ZNF542P-204ENST00000482727 1305 ntBASIC3.11□□□□□ -1.91
CKS1BP61024 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CKS1BP61024 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.11□□□□□ -1.91
CKS1BP61024 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
CKS1BP61024 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 AC108467.2-201ENST00000617640 1597 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC092326.2-201ENST00000624772 1561 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 OR4K17-201ENST00000315543 1032 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CKS1BP61024 SNORA71.2-201ENST00000364941 134 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AL590762.2-201ENST00000395798 571 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 ARL4AP5-201ENST00000404372 599 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CKS1BP61024 RPL12P43-201ENST00000420608 499 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 NPM1P26-201ENST00000426339 738 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 RPL23AP1-201ENST00000428990 471 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 CACYBPP1-201ENST00000438592 684 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AC092647.3-201ENST00000443044 633 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 VN1R32P-201ENST00000452234 905 ntBASIC3.1□□□□□ -1.91
CKS1BP61024 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.1□□□□□ -1.91
CKS1BP61024 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms