| WNT3 | P56703 | NMNAT1P5-201 | ENST00000559657 | 841 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC051619.4-201 | ENST00000560034 | 292 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | LINC01904-201 | ENST00000564872 | 861 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC015845.1-202 | ENST00000580184 | 242 nt | TSL 3 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | OR4K7P-201 | ENST00000580232 | 945 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC022916.4-201 | ENST00000585646 | 475 nt | TSL 3 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC016229.1-201 | ENST00000589242 | 487 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | LINC01835-202 | ENST00000589345 | 450 nt | TSL 3 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AL590229.1-201 | ENST00000603497 | 542 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | CLPTM1LP1-201 | ENST00000604519 | 484 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC010738.1-201 | ENST00000604970 | 987 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | BX323046.1-201 | ENST00000610145 | 535 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | RPL36A-210 | ENST00000614077 | 881 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | SOX2OT_exon1.1-201 | ENST00000614902 | 232 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | MIR6839-201 | ENST00000620425 | 113 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC091932.2-201 | ENST00000623014 | 291 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC007494.3-201 | ENST00000624660 | 743 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC116563.2-201 | ENST00000624751 | 535 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC074387.1-201 | ENST00000632044 | 823 nt | TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | AC011139.1-202 | ENST00000637744 | 563 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | CEP164P1-202 | ENST00000456938 | 2472 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | LINC01206-204 | ENST00000482787 | 9580 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | MIPOL1-204 | ENST00000539062 | 2389 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | PFKFB2-201 | ENST00000367079 | 3494 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | MGAM2-201 | ENST00000477922 | 7867 nt | APPRIS P1 TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | MAPK6PS3-201 | ENST00000403865 | 2162 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| WNT3 | P56703 | SRSF11-201 | ENST00000370949 | 3034 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ADAM5-202 | ENST00000399789 | 1942 nt | BASIC | 5.09 | □□□□□ -1.6 | | |
| WNT3 | P56703 | TMLHE-AS1-201 | ENST00000433624 | 1702 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LMO3-209 | ENST00000447609 | 3365 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | DNAJC10-208 | ENST00000537515 | 1669 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | CFH-206 | ENST00000630130 | 1658 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ASNSP1-204 | ENST00000641977 | 1664 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SLC38A11-204 | ENST00000409662 | 1542 nt | APPRIS P2 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LINC01619-207 | ENST00000551843 | 2205 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | C1orf112-201 | ENST00000286031 | 4355 nt | APPRIS P3 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC011912.1-201 | ENST00000623483 | 5819 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC021755.1-201 | ENST00000559747 | 1447 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | FKBP7-204 | ENST00000424785 | 2834 nt | APPRIS P3 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SEPT7-205 | ENST00000432293 | 1362 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | VCAN-201 | ENST00000265077 | 12625 nt | APPRIS P3 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | CCDC169-201 | ENST00000239859 | 708 nt | APPRIS P1 TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | OR9G4-201 | ENST00000302957 | 984 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | RNU6-304P-201 | ENST00000364855 | 107 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SLAMF6-201 | ENST00000368055 | 730 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ARGLU1-202 | ENST00000375926 | 821 nt | APPRIS P1 TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | Y_RNA.436-201 | ENST00000384097 | 102 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | HNRNPDP2-201 | ENST00000406475 | 478 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AL133264.1-201 | ENST00000407157 | 562 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | RPL23AP47-201 | ENST00000408017 | 460 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC002524.1-201 | ENST00000411687 | 547 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | MOBP-203 | ENST00000415443 | 577 nt | APPRIS ALT2 TSL 4 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC079760.2-203 | ENST00000418395 | 489 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SRSF1P1-201 | ENST00000424058 | 520 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | TXNIP-201 | ENST00000425134 | 1225 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | Z93242.1-201 | ENST00000427102 | 353 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LINC00266-4P-201 | ENST00000427373 | 842 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AL590666.1-201 | ENST00000428641 | 433 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LYPLA1P1-201 | ENST00000434514 | 622 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AL035701.1-201 | ENST00000444038 | 462 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | EEF1B2P5-201 | ENST00000444820 | 548 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | MTCYBP3-201 | ENST00000445588 | 1137 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | NOP56P2-201 | ENST00000447491 | 769 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | GAPDHP14-201 | ENST00000450472 | 937 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | TPMTP4-201 | ENST00000450749 | 678 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | RPL21P6-201 | ENST00000479171 | 504 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LINC02040-201 | ENST00000481004 | 556 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC058823.1-201 | ENST00000485315 | 474 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | LINC01323-201 | ENST00000486767 | 576 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC079226.2-201 | ENST00000509283 | 518 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC079921.1-201 | ENST00000509449 | 946 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | OTUD4-208 | ENST00000509620 | 864 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC093879.2-201 | ENST00000513645 | 427 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | RNU6-885P-201 | ENST00000516607 | 104 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | NRG1-IT1-202 | ENST00000521463 | 742 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | IAPP-204 | ENST00000539393 | 409 nt | APPRIS P1 TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC026401.1-201 | ENST00000549756 | 530 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC012464.2-201 | ENST00000551257 | 779 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | NDUFAF4P1-201 | ENST00000559425 | 519 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC092078.2-201 | ENST00000560900 | 581 nt | TSL 4 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ARPP19-205 | ENST00000563566 | 568 nt | TSL 4 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC113208.4-201 | ENST00000563568 | 206 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC016180.1-201 | ENST00000567945 | 403 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC010547.3-201 | ENST00000569271 | 440 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ISCA1P3-201 | ENST00000577104 | 373 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC100872.1-201 | ENST00000577765 | 501 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC004596.1-201 | ENST00000586560 | 528 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC010487.1-201 | ENST00000594408 | 1172 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SATB1-AS1-222 | ENST00000600177 | 751 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC133552.5-201 | ENST00000604266 | 540 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC013244.1-201 | ENST00000604279 | 193 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AC097505.1-201 | ENST00000610199 | 565 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SDR42E1P1-201 | ENST00000611327 | 477 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | AL442125.2-201 | ENST00000619338 | 418 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | MIR6719-201 | ENST00000622428 | 87 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | ADAM29-202 | ENST00000404450 | 3171 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | DAZ4-205 | ENST00000440066 | 1891 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | DAZ1-206 | ENST00000620725 | 1891 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | SNX10-202 | ENST00000396376 | 2491 nt | APPRIS P2 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| WNT3 | P56703 | KDM3B-209 | ENST00000542866 | 3634 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |