Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 AC073587.1-201ENST00000447093 876 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 UBA52P3-201ENST00000491303 382 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 OR51K1P-201ENST00000510214 950 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 BTF3P13-201ENST00000513224 490 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MTND2P32-201ENST00000521584 1038 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MORF4L1P3-201ENST00000525966 950 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AP000676.2-201ENST00000529711 301 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.08□□□□□ -1.6
HDAC4P56524 AL049839.1-201ENST00000556151 657 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC012254.4-201ENST00000588843 273 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC020910.3-201ENST00000603701 874 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AP001521.2-201ENST00000608772 546 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC009704.2-201ENST00000618739 483 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AL731566.2-201ENST00000618971 317 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC011815.3-201ENST00000624194 473 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC132825.7-201ENST00000638744 335 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC006927.2-201ENST00000639256 389 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC4P56524 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC4P56524 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC4P56524 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC4P56524 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC4P56524 AL627171.1-201ENST00000618845 1308 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HDAC4P56524 RNU6-178P-201ENST00000384631 104 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 FABP12P1-201ENST00000401911 322 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 RN7SKP199-201ENST00000410325 305 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC096533.1-201ENST00000411645 353 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 UBE2V1P9-201ENST00000414760 368 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC4P56524 MTCO3P4-201ENST00000419236 787 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AL590609.2-201ENST00000421430 368 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC099336.2-201ENST00000422457 254 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 RPS12P5-201ENST00000423449 371 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC4P56524 DEFB130D-201ENST00000426866 237 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 MTCO1P52-201ENST00000433928 531 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC112498.1-201ENST00000444401 332 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AL031584.1-201ENST00000447169 754 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 HIGD1AP8-201ENST00000453927 274 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC099560.2-201ENST00000457554 255 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 RPL5P30-201ENST00000465511 891 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 SUMO2P5-201ENST00000506790 245 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC4P56524 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC4P56524 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC4P56524 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC4P56524 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC4P56524 CYCSP40-201ENST00000575927 294 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 MIR548Y-201ENST00000582739 110 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC123786.2-201ENST00000603459 275 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC133644.2-201ENST00000608142 540 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 AC090510.2-201ENST00000617465 629 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AP001784.1-201ENST00000624107 428 ntBASIC5.07□□□□□ -1.6
HDAC4P56524 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
HDAC4P56524 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HDAC4P56524 IRF5P1-201ENST00000504852 2164 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HDAC4P56524 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 MTCO1P18-201ENST00000455518 1419 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC090017.1-201ENST00000548612 1779 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC4P56524 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC4P56524 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HDAC4P56524 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC4P56524 SNORA51.8-201ENST00000384234 132 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AL589647.1-201ENST00000402485 466 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC4P56524 AC023128.2-201ENST00000420880 1223 ntBASIC5.06□□□□□ -1.6
HDAC4P56524 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms