Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SNORA57.3-201ENST00000411095 141 ntBASIC5.71□□□□□ -1.5
CLTCL1P53675 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.71□□□□□ -1.5
CLTCL1P53675 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.71□□□□□ -1.5
CLTCL1P53675 NPM1P34-201ENST00000428821 893 ntBASIC5.71□□□□□ -1.5
CLTCL1P53675 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.71□□□□□ -1.5
CLTCL1P53675 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.71□□□□□ -1.5
CLTCL1P53675 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.71□□□□□ -1.5
CLTCL1P53675 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.71□□□□□ -1.5
CLTCL1P53675 AL645927.2-201ENST00000618350 349 ntBASIC5.71□□□□□ -1.5
CLTCL1P53675 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.71□□□□□ -1.5
CLTCL1P53675 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLTCL1P53675 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLTCL1P53675 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLTCL1P53675 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLTCL1P53675 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.7□□□□□ -1.5
CLTCL1P53675 RPL7P15-201ENST00000461190 712 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC093853.1-201ENST00000515689 483 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.7□□□□□ -1.5
CLTCL1P53675 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLTCL1P53675 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.7□□□□□ -1.5
CLTCL1P53675 NPM1P47-201ENST00000560843 856 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.7□□□□□ -1.5
CLTCL1P53675 AC012417.1-201ENST00000582307 1039 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 AC015967.1-201ENST00000619893 476 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLTCL1P53675 AL049781.1-201ENST00000623195 3585 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLTCL1P53675 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLTCL1P53675 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 ARL4AP3-201ENST00000441452 574 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 MIR3944-201ENST00000581277 108 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.7□□□□□ -1.5
CLTCL1P53675 AL353600.1-201ENST00000608148 251 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC012314.7-201ENST00000619693 93 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 AC244100.1-202ENST00000621554 382 ntBASIC5.7□□□□□ -1.5
CLTCL1P53675 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.7□□□□□ -1.5
CLTCL1P53675 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLTCL1P53675 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 RNA5SP97-201ENST00000365006 84 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLTCL1P53675 AL050321.1-201ENST00000432363 400 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 ARL4AP4-201ENST00000434170 518 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 CYCSP53-201ENST00000455540 265 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 IGKV2-23-201ENST00000518729 323 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 AC007066.2-202ENST00000566531 914 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 AC005344.1-201ENST00000613391 459 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 AC020978.9-201ENST00000624380 1141 ntBASIC5.69□□□□□ -1.5
CLTCL1P53675 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTCL1P53675 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLTCL1P53675 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLTCL1P53675 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLTCL1P53675 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLTCL1P53675 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 RNU1-15P-201ENST00000353977 144 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 RPL21P17-201ENST00000397467 475 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 HMGN2P31-201ENST00000432430 273 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 GEMIN8P3-201ENST00000445417 720 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 AC018635.1-201ENST00000468292 1030 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTCL1P53675 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTCL1P53675 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTCL1P53675 AC244505.7-201ENST00000599675 272 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CLTCL1P53675 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLTCL1P53675 AC112198.2-201ENST00000426589 6996 ntBASIC5.68□□□□□ -1.5
CLTCL1P53675 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 SAMMSON-213ENST00000641336 1521 ntBASIC5.67□□□□□ -1.5
CLTCL1P53675 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 SOD2P1-201ENST00000396543 562 ntBASIC5.67□□□□□ -1.5
CLTCL1P53675 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CLTCL1P53675 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 SYF2P2-201ENST00000417620 583 ntBASIC5.67□□□□□ -1.5
CLTCL1P53675 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTCL1P53675 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 AC006499.6-201ENST00000511169 607 ntBASIC5.67□□□□□ -1.5
CLTCL1P53675 AC021146.3-201ENST00000511911 260 ntBASIC5.67□□□□□ -1.5
CLTCL1P53675 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms