Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
RFC4P35249 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.56
RFC4P35249 AL022393.1-201ENST00000625142 1677 ntBASIC5.34□□□□□ -1.56
RFC4P35249 THAP12P5-201ENST00000405864 2275 ntBASIC5.34□□□□□ -1.56
RFC4P35249 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.34□□□□□ -1.56
RFC4P35249 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC4P35249 RNU4-44P-201ENST00000363050 141 ntBASIC5.33□□□□□ -1.56
RFC4P35249 RNU6-525P-201ENST00000363685 104 ntBASIC5.33□□□□□ -1.56
RFC4P35249 MIR7-3-201ENST00000384898 110 ntBASIC5.33□□□□□ -1.56
RFC4P35249 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
RFC4P35249 RPS3AP25-201ENST00000411660 793 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AC244033.1-201ENST00000426826 870 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC4P35249 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
RFC4P35249 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 PRSS3P4-201ENST00000453323 162 ntBASIC5.33□□□□□ -1.56
RFC4P35249 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 RPL7P49-201ENST00000471402 708 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.33□□□□□ -1.56
RFC4P35249 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC4P35249 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC4P35249 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.33□□□□□ -1.56
RFC4P35249 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.33□□□□□ -1.56
RFC4P35249 AC005255.1-201ENST00000593748 216 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AC096553.1-201ENST00000605169 829 ntBASIC5.33□□□□□ -1.56
RFC4P35249 SNORA51-201ENST00000606420 132 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AP002360.3-201ENST00000607673 710 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AL121772.2-201ENST00000614331 297 ntBASIC5.33□□□□□ -1.56
RFC4P35249 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFC4P35249 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.33□□□□□ -1.56
RFC4P35249 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC4P35249 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC4P35249 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 RNA5SP124-201ENST00000362739 110 ntBASIC5.32□□□□□ -1.56
RFC4P35249 RNA5SP151-201ENST00000365632 117 ntBASIC5.32□□□□□ -1.56
RFC4P35249 RAB9AP3-201ENST00000412737 573 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC4P35249 AC093578.1-201ENST00000415219 368 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AC013470.3-201ENST00000420252 1194 ntBASIC5.32□□□□□ -1.56
RFC4P35249 CDY14P-201ENST00000431260 1014 ntBASIC5.32□□□□□ -1.56
RFC4P35249 RPEP2-201ENST00000432149 701 ntBASIC5.32□□□□□ -1.56
RFC4P35249 CDY12P-201ENST00000440679 1015 ntBASIC5.32□□□□□ -1.56
RFC4P35249 CDY13P-201ENST00000445813 1015 ntBASIC5.32□□□□□ -1.56
RFC4P35249 MTND4LP12-201ENST00000448237 295 ntBASIC5.32□□□□□ -1.56
RFC4P35249 RAB9AP1-201ENST00000449393 573 ntBASIC5.32□□□□□ -1.56
RFC4P35249 CDY23P-201ENST00000451661 1014 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.32□□□□□ -1.56
RFC4P35249 HSPE1P22-201ENST00000456856 327 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC4P35249 RPS29P19-201ENST00000479709 171 ntBASIC5.32□□□□□ -1.56
RFC4P35249 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AC026726.1-201ENST00000512859 601 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC4P35249 RNA5SP446-201ENST00000515955 82 ntBASIC5.32□□□□□ -1.56
RFC4P35249 RN7SKP157-201ENST00000516174 282 ntBASIC5.32□□□□□ -1.56
RFC4P35249 PAICSP4-201ENST00000517543 1253 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
RFC4P35249 AC027455.1-201ENST00000574104 594 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 AL161756.2-201ENST00000604597 246 ntBASIC5.32□□□□□ -1.56
RFC4P35249 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.32□□□□□ -1.56
RFC4P35249 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 AL354798.1-201ENST00000622505 329 ntBASIC5.32□□□□□ -1.56
RFC4P35249 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
RFC4P35249 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC4P35249 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFC4P35249 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC4P35249 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFC4P35249 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC4P35249 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC4P35249 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RFC4P35249 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFC4P35249 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
RFC4P35249 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.31□□□□□ -1.56
RFC4P35249 AC009237.5-201ENST00000414271 501 ntBASIC5.31□□□□□ -1.56
RFC4P35249 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC4P35249 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.31□□□□□ -1.56
RFC4P35249 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC4P35249 GTF3AP5-201ENST00000442645 697 ntBASIC5.31□□□□□ -1.56
RFC4P35249 RPL7P15-201ENST00000461190 712 ntBASIC5.31□□□□□ -1.56
RFC4P35249 RPS4XP12-201ENST00000461747 709 ntBASIC5.31□□□□□ -1.56
RFC4P35249 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC4P35249 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.31□□□□□ -1.56
RFC4P35249 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC4P35249 AC022655.2-201ENST00000577280 318 ntBASIC5.31□□□□□ -1.56
RFC4P35249 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC4P35249 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC4P35249 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
RFC4P35249 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC4P35249 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 AL161912.2-201ENST00000565707 3007 ntBASIC5.3□□□□□ -1.56
RFC4P35249 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms