Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL5A1P20908 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.01□□□□□ -1.77
COL5A1P20908 SNORA70.24-201ENST00000517233 118 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 AC006064.5-201ENST00000541782 248 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 RPL21P12-201ENST00000559810 515 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 AL159169.3-201ENST00000608871 561 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 AL138721.1-201ENST00000616756 179 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 AC024023.1-201ENST00000624530 922 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL5A1P20908 ERCC6-202ENST00000374127 1782 ntBASIC4.01□□□□□ -1.77
COL5A1P20908 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
COL5A1P20908 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.01□□□□□ -1.77
COL5A1P20908 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL5A1P20908 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COL5A1P20908 AC007068.1-201ENST00000396690 844 ntBASIC4□□□□□ -1.77
COL5A1P20908 MIR1911-201ENST00000410783 80 ntBASIC4□□□□□ -1.77
COL5A1P20908 RPS23P10-201ENST00000416185 486 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC092647.1-201ENST00000420654 287 ntBASIC4□□□□□ -1.77
COL5A1P20908 HSFY1P1-201ENST00000423928 1178 ntBASIC4□□□□□ -1.77
COL5A1P20908 HSPE1P16-201ENST00000426640 348 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4□□□□□ -1.77
COL5A1P20908 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4□□□□□ -1.77
COL5A1P20908 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4□□□□□ -1.77
COL5A1P20908 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4□□□□□ -1.77
COL5A1P20908 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4□□□□□ -1.77
COL5A1P20908 RPL7P1-201ENST00000468161 747 ntBASIC4□□□□□ -1.77
COL5A1P20908 RPL7P9-201ENST00000468715 747 ntBASIC4□□□□□ -1.77
COL5A1P20908 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
COL5A1P20908 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4□□□□□ -1.77
COL5A1P20908 AC007991.1-201ENST00000522680 631 ntBASIC4□□□□□ -1.77
COL5A1P20908 IGKV2D-19-201ENST00000523346 262 ntBASIC4□□□□□ -1.77
COL5A1P20908 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 AL352979.3-201ENST00000553515 247 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4□□□□□ -1.77
COL5A1P20908 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL5A1P20908 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 RN7SKP156-201ENST00000410308 342 ntBASIC4□□□□□ -1.77
COL5A1P20908 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4□□□□□ -1.77
COL5A1P20908 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4□□□□□ -1.77
COL5A1P20908 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4□□□□□ -1.77
COL5A1P20908 HMGN2P31-201ENST00000432430 273 ntBASIC4□□□□□ -1.77
COL5A1P20908 NANOGP10-201ENST00000453325 895 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC006499.5-201ENST00000505037 514 ntBASIC4□□□□□ -1.77
COL5A1P20908 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4□□□□□ -1.77
COL5A1P20908 DUXAP2-201ENST00000519198 589 ntBASIC4□□□□□ -1.77
COL5A1P20908 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4□□□□□ -1.77
COL5A1P20908 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4□□□□□ -1.77
COL5A1P20908 AC093524.1-201ENST00000564266 1094 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC007066.2-202ENST00000566531 914 ntBASIC4□□□□□ -1.77
COL5A1P20908 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4□□□□□ -1.77
COL5A1P20908 AC110743.1-201ENST00000584870 478 ntBASIC4□□□□□ -1.77
COL5A1P20908 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL5A1P20908 CASC19-284ENST00000642142 1868 ntBASIC4□□□□□ -1.77
COL5A1P20908 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 A2MP1-204ENST00000566278 4130 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AC016588.2-201ENST00000632484 3021 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.99□□□□□ -1.77
COL5A1P20908 Y_RNA.111-201ENST00000363248 100 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 SNORA5A-201ENST00000384111 134 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.99□□□□□ -1.77
COL5A1P20908 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.99□□□□□ -1.77
COL5A1P20908 AC006011.1-201ENST00000442758 349 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.99□□□□□ -1.77
COL5A1P20908 AC007967.1-201ENST00000455422 1159 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AC108022.1-201ENST00000493466 478 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.99□□□□□ -1.77
COL5A1P20908 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 AL592436.1-201ENST00000605135 558 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 MIR7154-201ENST00000620673 73 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
COL5A1P20908 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 AC006042.3-201ENST00000454684 1469 ntBASIC3.99□□□□□ -1.77
COL5A1P20908 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL5A1P20908 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.99□□□□□ -1.77
COL5A1P20908 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 AC073346.2-201ENST00000624724 2058 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms