Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HMGA1P17096 RNU1-108P-201ENST00000362556 161 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 RNU1-85P-201ENST00000364127 164 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 MIR23B-201ENST00000384832 97 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
HMGA1P17096 AL500522.2-201ENST00000448562 343 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 FABP3P2-201ENST00000453169 399 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGA1P17096 AC007688.1-201ENST00000475592 759 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGA1P17096 AP002812.1-201ENST00000495378 474 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HMGA1P17096 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 AP001284.1-201ENST00000528393 2118 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 MIR4444-1-201ENST00000581696 74 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGA1P17096 MIR4444-2-201ENST00000584390 74 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 SNX6P1-201ENST00000601728 1224 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGA1P17096 FP236240.3-201ENST00000623061 327 ntBASIC4.17□□□□□ -1.74
HMGA1P17096 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGA1P17096 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGA1P17096 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.16□□□□□ -1.74
HMGA1P17096 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGA1P17096 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGA1P17096 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HMGA1P17096 AL139039.2-201ENST00000407436 479 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 SETP15-201ENST00000412724 337 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 AL450992.3-201ENST00000413192 568 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 DPPA2P2-201ENST00000418220 897 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 BMS1P19-201ENST00000433925 393 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 MAPRE1P3-201ENST00000435438 796 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGA1P17096 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGA1P17096 AC022795.1-201ENST00000473808 480 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 AC006517.1-201ENST00000480485 328 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGA1P17096 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.16□□□□□ -1.74
HMGA1P17096 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGA1P17096 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
HMGA1P17096 AC022968.1-201ENST00000567372 442 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 LSM1P2-201ENST00000604911 322 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 MIR7154-201ENST00000620673 73 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 AC112200.1-201ENST00000625015 234 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGA1P17096 AC006042.3-201ENST00000454684 1469 ntBASIC4.16□□□□□ -1.74
HMGA1P17096 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGA1P17096 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
HMGA1P17096 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.15□□□□□ -1.74
HMGA1P17096 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.15□□□□□ -1.74
HMGA1P17096 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HMGA1P17096 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGA1P17096 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGA1P17096 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGA1P17096 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HMGA1P17096 MIR30B-201ENST00000384850 88 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.15□□□□□ -1.75
HMGA1P17096 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGA1P17096 RPL12P18-201ENST00000437175 325 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGA1P17096 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGA1P17096 RPS3AP6-201ENST00000484430 795 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 RN7SL323P-201ENST00000494712 295 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AL139099.1-201ENST00000497398 403 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 STMN1P2-201ENST00000508435 439 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AP005262.1-201ENST00000582646 997 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AC015726.1-201ENST00000602353 681 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AL121890.2-201ENST00000617644 465 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGA1P17096 AC012442.3-202ENST00000636742 206 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 EIF3EP2-201ENST00000423042 1814 ntBASIC4.15□□□□□ -1.75
HMGA1P17096 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
HMGA1P17096 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGA1P17096 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HMGA1P17096 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGA1P17096 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HMGA1P17096 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HMGA1P17096 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGA1P17096 RNA5SP124-201ENST00000362739 110 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 TRAV35-201ENST00000390462 330 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 RNU6ATAC-201ENST00000408749 126 ntBASIC4.14□□□□□ -1.75
HMGA1P17096 RNA5SP146-201ENST00000410743 123 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms