Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP1P11387 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP1P11387 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP1P11387 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TOP1P11387 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP1P11387 RNA5SP22-201ENST00000365393 109 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP1P11387 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.05□□□□□ -1.6
TOP1P11387 ELOCP3-201ENST00000439303 348 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AL354710.1-201ENST00000453641 246 ntBASIC5.05□□□□□ -1.6
TOP1P11387 RPS20P4-201ENST00000461659 355 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP1P11387 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.05□□□□□ -1.6
TOP1P11387 AC108475.1-201ENST00000507880 950 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP1P11387 RNA5SP49-201ENST00000516450 115 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AF186190.1-201ENST00000517470 480 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AP003730.1-201ENST00000524605 285 ntBASIC5.05□□□□□ -1.6
TOP1P11387 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP1P11387 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.05□□□□□ -1.6
TOP1P11387 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP1P11387 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP1P11387 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.05□□□□□ -1.6
TOP1P11387 AC034236.3-201ENST00000605999 461 ntBASIC5.05□□□□□ -1.6
TOP1P11387 SNX18P1Y-201ENST00000616231 511 ntBASIC5.05□□□□□ -1.6
TOP1P11387 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP1P11387 AL023881.1-201ENST00000621088 301 ntBASIC5.05□□□□□ -1.6
TOP1P11387 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP1P11387 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP1P11387 AC009313.2-201ENST00000417893 1941 ntBASIC5.05□□□□□ -1.6
TOP1P11387 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP1P11387 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TOP1P11387 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.04□□□□□ -1.6
TOP1P11387 RN7SKP235-201ENST00000410662 305 ntBASIC5.04□□□□□ -1.6
TOP1P11387 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP1P11387 RPL6P29-201ENST00000414863 865 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP1P11387 EIF1P3-201ENST00000423841 334 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AL158073.1-201ENST00000426848 1104 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.04□□□□□ -1.6
TOP1P11387 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP1P11387 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.04□□□□□ -1.6
TOP1P11387 RPL7P22-201ENST00000466005 733 ntBASIC5.04□□□□□ -1.6
TOP1P11387 CCDC75P1-201ENST00000469247 791 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AL133372.1-201ENST00000493565 745 ntBASIC5.04□□□□□ -1.6
TOP1P11387 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.04□□□□□ -1.6
TOP1P11387 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP1P11387 PGBD4P4-201ENST00000509673 613 ntBASIC5.04□□□□□ -1.6
TOP1P11387 PPBPP1-201ENST00000510807 373 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP1P11387 NPM1P35-201ENST00000533043 868 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP1P11387 AC090312.1-201ENST00000580637 348 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP1P11387 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 AC005034.4-201ENST00000603612 899 ntBASIC5.04□□□□□ -1.6
TOP1P11387 AL445363.3-201ENST00000623080 671 ntBASIC5.04□□□□□ -1.6
TOP1P11387 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP1P11387 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP1P11387 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOP1P11387 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
TOP1P11387 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP1P11387 CASC19-284ENST00000642142 1868 ntBASIC5.03□□□□□ -1.6
TOP1P11387 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 MIR383-201ENST00000362257 73 ntBASIC5.03□□□□□ -1.6
TOP1P11387 RNU1-14P-201ENST00000362759 152 ntBASIC5.03□□□□□ -1.6
TOP1P11387 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 AL161909.1-201ENST00000397390 712 ntBASIC5.03□□□□□ -1.6
TOP1P11387 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.03□□□□□ -1.6
TOP1P11387 AMZ2P2-201ENST00000406819 1057 ntBASIC5.03□□□□□ -1.6
TOP1P11387 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 MIR1911-201ENST00000410783 80 ntBASIC5.03□□□□□ -1.6
TOP1P11387 GSTM3P2-201ENST00000412746 530 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 OR2X1P-201ENST00000421144 687 ntBASIC5.03□□□□□ -1.6
TOP1P11387 OR6K4P-201ENST00000423179 955 ntBASIC5.03□□□□□ -1.6
TOP1P11387 GTF2IP2-201ENST00000424290 697 ntBASIC5.03□□□□□ -1.6
TOP1P11387 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.03□□□□□ -1.6
TOP1P11387 MAPRE1P3-201ENST00000435438 796 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TOP1P11387 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
TOP1P11387 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP1P11387 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 AL592156.1-201ENST00000508758 304 ntBASIC5.03□□□□□ -1.6
TOP1P11387 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.03□□□□□ -1.6
TOP1P11387 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 RNA5SP73-201ENST00000516744 108 ntBASIC5.03□□□□□ -1.6
TOP1P11387 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.03□□□□□ -1.6
TOP1P11387 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP1P11387 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.03□□□□□ -1.6
TOP1P11387 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms