Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 MTCO1P18-201ENST00000455518 1419 ntBASIC4.39□□□□□ -1.71
PRKNO60260 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 AC079741.1-201ENST00000321498 212 ntBASIC4.39□□□□□ -1.71
PRKNO60260 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 RNU6-398P-201ENST00000384143 109 ntBASIC4.39□□□□□ -1.71
PRKNO60260 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 AC092648.1-201ENST00000425870 423 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC004938.1-201ENST00000438468 308 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 OR10R1P-201ENST00000441524 1141 ntBASIC4.39□□□□□ -1.71
PRKNO60260 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 CEACAMP6-201ENST00000452007 574 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL513533.1-201ENST00000453728 415 ntBASIC4.39□□□□□ -1.71
PRKNO60260 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 AC021205.1-201ENST00000468797 348 ntBASIC4.39□□□□□ -1.71
PRKNO60260 RPL23AP72-201ENST00000492447 435 ntBASIC4.39□□□□□ -1.71
PRKNO60260 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC113420.1-201ENST00000507903 571 ntBASIC4.39□□□□□ -1.71
PRKNO60260 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 PRELID3BP5-201ENST00000508612 460 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 RNA5SP228-201ENST00000516232 133 ntBASIC4.39□□□□□ -1.71
PRKNO60260 RNU1-6P-201ENST00000516290 144 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.39□□□□□ -1.71
PRKNO60260 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 AC027455.1-201ENST00000574104 594 ntBASIC4.39□□□□□ -1.71
PRKNO60260 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 MIR4675-201ENST00000577898 77 ntBASIC4.39□□□□□ -1.71
PRKNO60260 MIR4330-201ENST00000579077 105 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 AL049844.2-201ENST00000604280 628 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL136295.6-201ENST00000610486 658 ntBASIC4.39□□□□□ -1.71
PRKNO60260 MIR6820-201ENST00000611508 62 ntBASIC4.39□□□□□ -1.71
PRKNO60260 PART1_2.1-201ENST00000612397 250 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 AC009464.1-201ENST00000615731 469 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AC006386.1-201ENST00000619436 415 ntBASIC4.39□□□□□ -1.71
PRKNO60260 AC048344.4-201ENST00000619744 527 ntBASIC4.39□□□□□ -1.71
PRKNO60260 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.39□□□□□ -1.71
PRKNO60260 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 DDX18P5-201ENST00000534547 1306 ntBASIC4.39□□□□□ -1.71
PRKNO60260 ZNF849P-201ENST00000594711 1566 ntBASIC4.39□□□□□ -1.71
PRKNO60260 UGT2B26P-201ENST00000508672 1613 ntBASIC4.39□□□□□ -1.71
PRKNO60260 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.39□□□□□ -1.71
PRKNO60260 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PRKNO60260 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRKNO60260 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 RBPJP2-201ENST00000618187 1444 ntBASIC4.38□□□□□ -1.71
PRKNO60260 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 THAP12P5-201ENST00000405864 2275 ntBASIC4.38□□□□□ -1.71
PRKNO60260 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRKNO60260 RN7SKP115-201ENST00000363177 317 ntBASIC4.38□□□□□ -1.71
PRKNO60260 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRKNO60260 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRKNO60260 RNU6-906P-201ENST00000384700 70 ntBASIC4.38□□□□□ -1.71
PRKNO60260 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRKNO60260 RNU2-50P-201ENST00000410494 143 ntBASIC4.38□□□□□ -1.71
PRKNO60260 HIGD1AP15-201ENST00000416198 280 ntBASIC4.38□□□□□ -1.71
PRKNO60260 ATG4AP1-201ENST00000416893 538 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC069213.2-201ENST00000420238 366 ntBASIC4.38□□□□□ -1.71
PRKNO60260 USP9YP21-201ENST00000420603 432 ntBASIC4.38□□□□□ -1.71
PRKNO60260 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 EIF4HP2-201ENST00000424380 563 ntBASIC4.38□□□□□ -1.71
PRKNO60260 HMGN2P27-201ENST00000427352 270 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AL359265.2-201ENST00000434367 631 ntBASIC4.38□□□□□ -1.71
PRKNO60260 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
PRKNO60260 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 YWHAZP2-201ENST00000440317 728 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.38□□□□□ -1.71
PRKNO60260 AC011753.3-201ENST00000443436 406 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AL591719.1-201ENST00000444669 744 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms