Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SMAD6O43541 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SMAD6O43541 RPL37P18-201ENST00000411602 243 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 MTND2P18-201ENST00000419962 1030 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.91□□□□□ -1.62
SMAD6O43541 NPM1P26-201ENST00000426339 738 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.91□□□□□ -1.62
SMAD6O43541 MTCO3P5-201ENST00000433620 714 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 KCTD10P1-201ENST00000434203 625 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.91□□□□□ -1.62
SMAD6O43541 CYCSP24-201ENST00000445119 316 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.91□□□□□ -1.62
SMAD6O43541 HMGB1P26-201ENST00000452520 628 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 RN7SL517P-201ENST00000462240 305 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 RPL21P18-201ENST00000469899 480 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC037198.2-201ENST00000478845 733 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC073073.1-201ENST00000493920 463 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC023424.1-201ENST00000496058 459 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.91□□□□□ -1.62
SMAD6O43541 CDH12P4-201ENST00000517835 295 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 CDH12P3-201ENST00000517935 295 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 SEC11B-201ENST00000518383 499 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 CDH12P1-201ENST00000518435 295 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 MRPS36P3-201ENST00000519284 130 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.91□□□□□ -1.62
SMAD6O43541 OR10V3P-201ENST00000525712 725 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC005868.1-201ENST00000536421 331 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC008147.3-201ENST00000548666 354 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 ZNF321P-202ENST00000550843 495 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.91□□□□□ -1.62
SMAD6O43541 VN1R78P-201ENST00000597393 564 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 SNX6P1-201ENST00000601728 1224 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AL512782.1-201ENST00000603093 364 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 MIR7703-201ENST00000620784 77 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC093875.1-201ENST00000623688 504 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AP000648.2-201ENST00000624182 404 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.91□□□□□ -1.62
SMAD6O43541 AC073869.10-201ENST00000642016 354 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 THAP12P5-201ENST00000405864 2275 ntBASIC4.91□□□□□ -1.62
SMAD6O43541 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SMAD6O43541 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMAD6O43541 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SMAD6O43541 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SMAD6O43541 AL121950.1-201ENST00000624993 2077 ntBASIC4.9□□□□□ -1.62
SMAD6O43541 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMAD6O43541 AC025574.1-201ENST00000554784 1653 ntBASIC4.9□□□□□ -1.62
SMAD6O43541 OR10AB1P-202ENST00000641219 1686 ntBASIC4.9□□□□□ -1.62
SMAD6O43541 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SMAD6O43541 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMAD6O43541 ASNSP1-201ENST00000518311 1939 ntBASIC4.9□□□□□ -1.62
SMAD6O43541 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.9□□□□□ -1.62
SMAD6O43541 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SMAD6O43541 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 OR5H2-201ENST00000355273 945 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SMAD6O43541 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 AC234772.1-201ENST00000377927 937 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 RN7SKP182-201ENST00000410772 298 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AL031779.1-201ENST00000415663 330 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 ARAFP1-201ENST00000422172 605 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 RPS26P47-201ENST00000427219 348 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 HIGD1AP4-201ENST00000430194 280 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.9□□□□□ -1.63
SMAD6O43541 RPS26P4-201ENST00000431743 355 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 NDUFA5P10-201ENST00000432147 357 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 NRBF2P3-201ENST00000432731 865 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC005154.2-201ENST00000438110 379 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 EIF4A1P11-201ENST00000451239 222 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AL354710.1-201ENST00000453641 246 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC008379.1-201ENST00000463655 464 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 SETP6-201ENST00000479329 568 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC007686.1-201ENST00000488511 463 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms