Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC7.17□□□□□ -1.26
CUX2O14529 RPS4XP15-201ENST00000489210 795 ntBASIC7.17□□□□□ -1.26
CUX2O14529 UBE2CP3-201ENST00000502715 450 ntBASIC7.17□□□□□ -1.26
CUX2O14529 AC093853.1-201ENST00000515689 483 ntBASIC7.17□□□□□ -1.26
CUX2O14529 MIR8057-201ENST00000620957 69 ntBASIC7.17□□□□□ -1.26
CUX2O14529 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.17□□□□□ -1.26
CUX2O14529 FP325313.1-201ENST00000638228 703 ntBASIC7.17□□□□□ -1.26
CUX2O14529 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUX2O14529 LYST-202ENST00000389794 12985 ntTSL 5 BASIC7.17□□□□□ -1.26
CUX2O14529 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUX2O14529 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.17□□□□□ -1.26
CUX2O14529 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CUX2O14529 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC7.17□□□□□ -1.26
CUX2O14529 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CUX2O14529 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.17□□□□□ -1.26
CUX2O14529 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUX2O14529 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUX2O14529 MTND4LP20-201ENST00000402379 270 ntBASIC7.17□□□□□ -1.26
CUX2O14529 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.17□□□□□ -1.26
CUX2O14529 AL160175.1-201ENST00000428124 247 ntBASIC7.17□□□□□ -1.26
CUX2O14529 AC018635.1-201ENST00000468292 1030 ntBASIC7.17□□□□□ -1.26
CUX2O14529 ATP1B1P1-201ENST00000509767 915 ntBASIC7.17□□□□□ -1.26
CUX2O14529 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.17□□□□□ -1.26
CUX2O14529 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC7.17□□□□□ -1.26
CUX2O14529 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC7.17□□□□□ -1.26
CUX2O14529 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7.17□□□□□ -1.26
CUX2O14529 AP002360.3-201ENST00000607673 710 ntBASIC7.17□□□□□ -1.26
CUX2O14529 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC7.16□□□□□ -1.26
CUX2O14529 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUX2O14529 AC005261.2-201ENST00000593427 4258 ntBASIC7.16□□□□□ -1.26
CUX2O14529 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUX2O14529 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CUX2O14529 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC7.16□□□□□ -1.26
CUX2O14529 BDP1P-201ENST00000582658 1990 ntBASIC7.16□□□□□ -1.26
CUX2O14529 AL356968.2-201ENST00000412769 1257 ntBASIC7.16□□□□□ -1.26
CUX2O14529 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUX2O14529 SERPINA7P1-201ENST00000443077 631 ntBASIC7.16□□□□□ -1.26
CUX2O14529 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.16□□□□□ -1.26
CUX2O14529 AC104164.2-201ENST00000496953 495 ntBASIC7.16□□□□□ -1.26
CUX2O14529 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.16□□□□□ -1.26
CUX2O14529 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.16□□□□□ -1.26
CUX2O14529 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC7.16□□□□□ -1.26
CUX2O14529 AC010201.1-201ENST00000605051 540 ntBASIC7.16□□□□□ -1.26
CUX2O14529 AC135507.2-201ENST00000612443 309 ntBASIC7.16□□□□□ -1.26
CUX2O14529 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUX2O14529 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUX2O14529 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CUX2O14529 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.15□□□□□ -1.26
CUX2O14529 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC7.15□□□□□ -1.26
CUX2O14529 AC000374.1-201ENST00000434698 1745 ntBASIC7.15□□□□□ -1.26
CUX2O14529 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC7.15□□□□□ -1.27
CUX2O14529 TBCAP1-201ENST00000436520 327 ntBASIC7.15□□□□□ -1.27
CUX2O14529 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.15□□□□□ -1.27
CUX2O14529 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.15□□□□□ -1.27
CUX2O14529 HMGB3P16-201ENST00000508037 287 ntBASIC7.15□□□□□ -1.27
CUX2O14529 AC104619.4-201ENST00000510773 249 ntBASIC7.15□□□□□ -1.27
CUX2O14529 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC7.15□□□□□ -1.27
CUX2O14529 RNA5SP249-201ENST00000516127 99 ntBASIC7.15□□□□□ -1.27
CUX2O14529 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC7.15□□□□□ -1.27
CUX2O14529 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.15□□□□□ -1.27
CUX2O14529 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.15□□□□□ -1.27
CUX2O14529 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CUX2O14529 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CUX2O14529 NXPH1-205ENST00000602349 1953 ntBASIC7.15□□□□□ -1.27
CUX2O14529 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CUX2O14529 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC7.15□□□□□ -1.27
CUX2O14529 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CUX2O14529 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CUX2O14529 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CUX2O14529 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CUX2O14529 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC7.14□□□□□ -1.27
CUX2O14529 OR2AH1P-201ENST00000425717 928 ntBASIC7.14□□□□□ -1.27
CUX2O14529 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.14□□□□□ -1.27
CUX2O14529 RPL23AP46-201ENST00000438548 490 ntBASIC7.14□□□□□ -1.27
CUX2O14529 AL445433.1-201ENST00000457507 257 ntBASIC7.14□□□□□ -1.27
CUX2O14529 RPL38P1-201ENST00000460914 211 ntBASIC7.14□□□□□ -1.27
CUX2O14529 RPL35AP15-201ENST00000468042 339 ntBASIC7.14□□□□□ -1.27
CUX2O14529 RN7SL323P-201ENST00000494712 295 ntBASIC7.14□□□□□ -1.27
CUX2O14529 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.14□□□□□ -1.27
CUX2O14529 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC7.14□□□□□ -1.27
CUX2O14529 EIF4BP1-201ENST00000554881 351 ntBASIC7.14□□□□□ -1.27
CUX2O14529 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC7.14□□□□□ -1.27
CUX2O14529 AC091178.1-203ENST00000584586 279 ntBASIC7.14□□□□□ -1.27
CUX2O14529 BDH2P1-201ENST00000602288 736 ntBASIC7.14□□□□□ -1.27
CUX2O14529 IMMP1LP1-201ENST00000605170 488 ntBASIC7.14□□□□□ -1.27
CUX2O14529 AL021997.2-201ENST00000615674 271 ntBASIC7.14□□□□□ -1.27
CUX2O14529 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC7.14□□□□□ -1.27
CUX2O14529 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUX2O14529 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms