Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 LAP3P1-201ENST00000403648 294 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 TRIM60P17-201ENST00000415181 719 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 RPL21P91-201ENST00000429231 479 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 NUTF2P3-201ENST00000448540 384 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 RPL31P53-201ENST00000457065 348 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 RNU6-319P-201ENST00000516025 108 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 MTCYBP19-201ENST00000517463 1124 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC138701.1-201ENST00000524329 714 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 CYCSP29-201ENST00000533731 318 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 HMGB3P26-201ENST00000560051 582 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC079587.1-201ENST00000603846 277 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC113403.1-201ENST00000604910 193 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 uc_338.13-201ENST00000618243 179 ntBASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP2Q9UDT6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC026951.1-201ENST00000559530 2459 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 EIF2AP4-201ENST00000424793 1781 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 MAPK10-304ENST00000641341 3984 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RNU4-23P-201ENST00000362839 140 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RNU6-670P-201ENST00000364312 104 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RNA5SP151-201ENST00000365632 117 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RNU6-891P-201ENST00000384280 111 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 ST13P16-201ENST00000401760 781 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RPS20P14-201ENST00000412545 360 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 IPMKP1-201ENST00000425988 855 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 GEMIN8P3-201ENST00000445417 720 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 RPL7AP52-201ENST00000458096 790 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC068587.1-201ENST00000483613 781 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC098799.1-201ENST00000504752 800 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC090151.1-201ENST00000520784 730 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC109635.6-201ENST00000525487 1113 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 TRAV8-5-201ENST00000537369 341 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC011477.5-201ENST00000586571 259 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC091905.2-201ENST00000623143 306 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC010300.1-201ENST00000600671 5134 ntBASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP2Q9UDT6 AC007342.9-201ENST00000623877 1385 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 KPNA2P2-201ENST00000419546 1489 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 RNU1-132P-201ENST00000364300 164 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 RNU1-63P-201ENST00000383902 164 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 SNORA11F-201ENST00000408237 128 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 AL160275.2-201ENST00000412010 394 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 NRBF2P2-201ENST00000413087 861 ntBASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.16□□□□□ -1.58
CLIP2Q9UDT6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms