Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL133445.1-201ENST00000467051 452 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 COPS8P2-201ENST00000473228 627 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC023424.2-201ENST00000493479 777 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC108941.1-201ENST00000502853 530 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 BX510359.5-201ENST00000515651 304 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC124947.2-202ENST00000552735 133 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL049872.1-201ENST00000556323 322 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 TXNP4-201ENST00000575018 310 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC012065.4-201ENST00000602445 679 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL121757.2-201ENST00000611223 313 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RPS4XP5-202ENST00000449995 1334 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 MTCO1P23-201ENST00000415223 1526 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR9G4-201ENST00000302957 984 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 Y_RNA.453-201ENST00000384223 109 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AP000357.1-201ENST00000409926 1165 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 HSPE1P16-201ENST00000426640 348 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 MTCO1P54-201ENST00000430139 712 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL050321.1-201ENST00000432363 400 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 MTND3P21-201ENST00000433774 331 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 RPL12P3-201ENST00000440080 396 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 ARL5AP2-201ENST00000444698 533 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 HIGD1AP8-201ENST00000453927 274 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 RN7SL72P-201ENST00000460697 269 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 IGLV3-30-201ENST00000524362 298 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR5BC1P-201ENST00000529327 739 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR5D15P-201ENST00000531671 942 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 OR7K1P-201ENST00000546439 926 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 IMMP1LP3-201ENST00000604197 224 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC133552.5-201ENST00000604266 540 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL390816.3-201ENST00000604527 1066 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL353726.1-201ENST00000614041 1000 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AC023158.2-201ENST00000614876 543 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL359697.1-201ENST00000624879 587 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AP002001.2-201ENST00000529025 1469 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 AL121768.1-201ENST00000613917 2544 ntBASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SYNGAP1Q96PV0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SYNGAP1Q96PV0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms