Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AL356317.1-201ENST00000396110 1436 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC097374.1-203ENST00000400783 485 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 FABP12P1-201ENST00000401911 322 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 GAPDHP49-201ENST00000421421 961 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC023141.6-201ENST00000429418 337 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 PRELID3BP5-201ENST00000508612 460 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC093840.1-201ENST00000511599 336 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 OR5M7P-201ENST00000526140 972 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC068831.4-201ENST00000556118 109 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC010615.3-201ENST00000597319 394 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC012603.1-201ENST00000606424 528 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AC015922.4-201ENST00000612568 690 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AP005212.4-201ENST00000614206 710 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AL356274.1-201ENST00000617064 410 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 AL035461.2-201ENST00000619201 524 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 FP325313.1-201ENST00000638228 703 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 ASNSP1-201ENST00000518311 1939 ntBASIC4.42□□□□□ -1.7
C9orf72Q96LT7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC026951.1-201ENST00000559530 2459 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC068538.1-201ENST00000376856 336 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 RPL7AP25-201ENST00000423357 805 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CHIAP3-201ENST00000423668 1133 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AL353748.1-201ENST00000440753 474 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC114495.1-201ENST00000441274 436 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AL357520.1-201ENST00000441557 453 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 APOOP2-201ENST00000461561 539 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC025554.1-201ENST00000505641 188 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC025674.1-201ENST00000507074 324 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC012409.3-201ENST00000611343 981 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC006338.2-201ENST00000616864 791 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C9orf72Q96LT7 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
C9orf72Q96LT7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.4□□□□□ -1.7
C9orf72Q96LT7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 SNORA70.2-201ENST00000364506 135 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 RNU4-25P-201ENST00000410569 230 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 RNA5SP104-201ENST00000410989 118 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AL139095.3-201ENST00000419672 1203 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AC092017.2-201ENST00000427600 362 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AL035551.1-201ENST00000446931 348 ntBASIC4.4□□□□□ -1.71
C9orf72Q96LT7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.4□□□□□ -1.71
C9orf72Q96LT7 AP000827.1-201ENST00000527814 258 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms