Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC095055.1-201ENST00000603472 1113 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC113368.1-201ENST00000603736 382 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC090897.3-201ENST00000636973 1157 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC017104.5-201ENST00000637647 639 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC083843.3-201ENST00000623679 2186 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC063976.2-201ENST00000425667 3556 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 BTBD10P1-201ENST00000549824 1352 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SNURFL-201ENST00000309296 343 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 TAS2R15P-201ENST00000390674 928 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL645733.1-201ENST00000402250 217 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL035079.1-201ENST00000405210 287 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SNORA11C-201ENST00000408532 129 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 TRGV6-201ENST00000417928 299 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 RPL35AP21-201ENST00000437667 333 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 CR769776.1-201ENST00000441254 787 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 RPL34P20-201ENST00000442771 351 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 RPS26P30-201ENST00000443431 335 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC245028.2-201ENST00000458673 253 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC109462.1-201ENST00000491087 368 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC010306.1-201ENST00000523223 1117 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SULT1C2P2-201ENST00000562517 294 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AP002799.1-201ENST00000623552 423 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 OR1S1-201ENST00000624470 978 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC131971.1-201ENST00000332881 1482 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC073429.2-201ENST00000569694 1444 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 IRF5P1-201ENST00000504852 2164 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 AC027228.2-201ENST00000567141 2154 ntBASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CHMP4CQ96CF2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 ADAM5-202ENST00000399789 1942 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 MIR1182-201ENST00000408363 97 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC002524.1-201ENST00000411687 547 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 C1DP1-201ENST00000426049 402 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 OR5AW1P-201ENST00000426334 1006 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 EEF1A1P39-201ENST00000440791 250 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 Z73417.1-201ENST00000447373 778 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 RPS6P2-201ENST00000454208 705 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC068587.2-201ENST00000478386 781 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 METTL15P1-201ENST00000481421 1045 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 HMGB1P23-201ENST00000518743 568 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 MTCO3P15-201ENST00000526563 574 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms