Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC4Q92889 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC4Q92889 DUXAP11-201ENST00000603858 526 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 AL163642.2-201ENST00000604722 1019 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 AC010738.1-201ENST00000604970 987 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 AC011472.4-201ENST00000615848 491 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC4Q92889 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC4Q92889 MIR4278-201ENST00000636094 69 ntBASIC5.98□□□□□ -1.45
ERCC4Q92889 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
ERCC4Q92889 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ERCC4Q92889 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ERCC4Q92889 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC4Q92889 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC4Q92889 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC4Q92889 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC4Q92889 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 RLIMP2-201ENST00000427891 1563 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC4Q92889 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 RNU6-185P-201ENST00000384421 107 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC093719.1-202ENST00000392735 373 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AL590084.2-201ENST00000401481 382 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 COX5BP7-201ENST00000414780 274 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 RPL21P43-201ENST00000425440 472 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 CNOT7P1-201ENST00000429006 852 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC124944.2-201ENST00000429866 1242 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC4Q92889 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AL353706.1-201ENST00000436728 494 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 NPM1P33-201ENST00000438918 872 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 TAF9P1-201ENST00000445421 515 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AL360221.1-201ENST00000445989 335 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC012512.1-201ENST00000446594 718 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 MTND2P19-201ENST00000449129 1012 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 VN1R32P-201ENST00000452234 905 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 TAF9P2-201ENST00000454958 515 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 RANP1-206ENST00000455094 651 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 CCDC75P1-201ENST00000469247 791 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 RN7SL814P-201ENST00000487715 300 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC093755.1-201ENST00000512950 1023 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC124293.1-201ENST00000530034 493 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AP000619.3-201ENST00000535634 1127 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC007115.1-201ENST00000546853 234 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 IGBP1P1-201ENST00000554337 1009 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AL049872.1-201ENST00000556323 322 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC022884.2-201ENST00000578535 580 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC4Q92889 MIR4999-201ENST00000585029 91 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC4Q92889 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC024595.1-201ENST00000623088 387 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC007342.8-201ENST00000623278 678 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 AP005901.5-201ENST00000545779 1796 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 AP000776.1-201ENST00000530032 1663 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 AC063976.2-201ENST00000425667 3556 ntBASIC5.97□□□□□ -1.45
ERCC4Q92889 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ERCC4Q92889 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC4Q92889 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC4Q92889 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC4Q92889 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.96□□□□□ -1.45
ERCC4Q92889 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.96□□□□□ -1.45
ERCC4Q92889 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC4Q92889 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ERCC4Q92889 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC4Q92889 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
ERCC4Q92889 TMSB4XP4-201ENST00000323496 618 ntBASIC5.96□□□□□ -1.46
ERCC4Q92889 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC4Q92889 RNA5SP46-201ENST00000362370 120 ntBASIC5.96□□□□□ -1.46
ERCC4Q92889 RNA5SP234-201ENST00000363916 119 ntBASIC5.96□□□□□ -1.46
ERCC4Q92889 RNU6-707P-201ENST00000364647 95 ntBASIC5.96□□□□□ -1.46
ERCC4Q92889 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
ERCC4Q92889 AC104297.1-201ENST00000393779 870 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms