Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SMG1P4-204ENST00000523028 4131 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 RNA5SP183-201ENST00000362452 119 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORD116-9-201ENST00000384000 95 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORD116-3-201ENST00000384287 95 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORD116-7-201ENST00000384404 95 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORD116-5-201ENST00000384462 95 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MIR320B1-201ENST00000390209 79 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORA17A-201ENST00000391185 133 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 LINC01881-201ENST00000416103 412 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MTCO3P5-201ENST00000433620 714 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AL450023.3-201ENST00000440592 271 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 ARL4AP3-201ENST00000441452 574 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MTND5P2-201ENST00000442927 1142 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC004980.3-201ENST00000447046 365 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC009127.1-201ENST00000467090 155 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC011979.1-201ENST00000472300 483 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 RPS3AP43-201ENST00000479743 781 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 UBA52P7-201ENST00000486088 380 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC069304.1-201ENST00000491593 704 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC111193.1-201ENST00000504097 155 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 PGAM1P13-201ENST00000507497 754 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MTND1P22-201ENST00000510572 951 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 RPL23AP53-201ENST00000521854 457 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC012339.2-201ENST00000523996 453 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC005951.1-201ENST00000576706 485 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC068790.2-201ENST00000602601 557 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 BNIP3P4-201ENST00000604946 565 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AP000238.1-201ENST00000608759 426 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC099676.1-201ENST00000608886 657 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC079395.2-201ENST00000610982 737 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC105227.2-201ENST00000615075 605 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SNORA17.5-201ENST00000630429 132 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MFSD8-245ENST00000641743 948 ntBASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4AQ8WYN0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AL672167.1-205ENST00000641112 3080 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC026523.2-201ENST00000625039 7739 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RN7SKP113-201ENST00000363891 295 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNA5SP435-201ENST00000364044 108 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-98P-201ENST00000384173 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 SNORA70.10-201ENST00000384515 134 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 MIR525-201ENST00000384978 85 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-1320P-201ENST00000390838 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-1269P-201ENST00000391139 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RN7SKP114-201ENST00000410327 279 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 NPM1P40-201ENST00000412758 733 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 AC011233.1-201ENST00000422812 283 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CNOT7P1-201ENST00000429006 852 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CDY14P-201ENST00000431260 1014 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 THAP5P1-201ENST00000439089 262 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CDY23P-201ENST00000451661 1014 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 HMGB1P4-201ENST00000455362 567 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-599P-201ENST00000459383 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RNU6-1193P-201ENST00000459461 107 ntBASIC5.2□□□□□ -1.58
ATG4AQ8WYN0 RPS17P2-201ENST00000461663 408 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms