Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 AL137100.1-201ENST00000556703 1620 ntBASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 Z98755.1-201ENST00000407015 1384 ntBASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
CDKL3Q8IVW4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC009313.2-201ENST00000417893 1941 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC092079.1-201ENST00000558620 1985 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 RNA5SP388-201ENST00000362584 119 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 RNU6-146P-201ENST00000384602 108 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AL583835.1-201ENST00000399570 407 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 RNU6-603P-201ENST00000411403 107 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 RPL12P28-201ENST00000430852 489 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 RPL23AP89-201ENST00000439324 255 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ELOCP10-201ENST00000440624 327 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 BNIP3P41-201ENST00000503774 571 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 UBTFL9-201ENST00000534504 1148 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ELOCP34-201ENST00000604436 327 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 MIR6748-201ENST00000610433 71 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC009237.17-201ENST00000618111 748 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 MIR7703-201ENST00000620784 77 ntBASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL3Q8IVW4 AL592437.2-201ENST00000421655 2434 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RNU6-398P-201ENST00000384143 109 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RAB9AP4-201ENST00000415230 609 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RPL12P34-201ENST00000424532 479 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RPS6P12-201ENST00000432491 726 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AL138878.2-201ENST00000440581 1241 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 TXNP2-201ENST00000443918 295 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RPS29P19-201ENST00000479709 171 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 RPS27AP16-201ENST00000492222 470 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 MYL12AP1-201ENST00000518490 515 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC019193.2-201ENST00000610012 634 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AL035461.2-201ENST00000619201 524 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC008785.1-201ENST00000624475 456 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC008013.2-202ENST00000637965 364 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 AC123912.3-201ENST00000600907 1367 ntBASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL3Q8IVW4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms