Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 HIGD1AP18-201ENST00000520730 278 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 GNRHR2P1-201ENST00000555315 631 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC015726.1-201ENST00000602353 681 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 RNU1-33P-201ENST00000364249 162 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 HMGB3P19-201ENST00000403971 560 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC005520.3-201ENST00000602874 370 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC000374.1-201ENST00000434698 1745 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC105074.1-201ENST00000623380 3095 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 CBX1P3-201ENST00000413296 527 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AL591503.2-201ENST00000442314 1005 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 RPS4XP10-201ENST00000465034 731 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AGGF1P3-201ENST00000493675 1213 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC130352.1-201ENST00000602979 661 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AP001284.1-201ENST00000528393 2118 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 SNORA3.3-201ENST00000408712 125 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 MIR4672-201ENST00000583126 81 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC020914.6-201ENST00000594327 272 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 MIR8058-201ENST00000615737 89 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC119674.1-212ENST00000641155 993 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC2.78□□□□□ -1.96
CSMD3Q7Z407 AC092435.4-201ENST00000623012 4159 ntBASIC2.78□□□□□ -1.96
CSMD3Q7Z407 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CSMD3Q7Z407 AL592291.1-201ENST00000403830 352 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 AC079809.1-201ENST00000415468 276 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 APOOP2-201ENST00000461561 539 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 RPL7P1-201ENST00000468161 747 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 RPL5P23-201ENST00000496040 868 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 RANP9-201ENST00000519957 271 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.78□□□□□ -1.97
CSMD3Q7Z407 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.78□□□□□ -1.97
CSMD3Q7Z407 AC233263.6-201ENST00000631132 1963 ntBASIC2.78□□□□□ -1.97
CSMD3Q7Z407 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CSMD3Q7Z407 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC073073.2-201ENST00000609827 2578 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RPL7P44-201ENST00000424827 742 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 Z75741.1-201ENST00000446793 314 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RPL7P23-201ENST00000493874 747 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RNA5SP179-201ENST00000517284 121 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 NPM1P47-201ENST00000560843 856 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 MIR4513-201ENST00000581077 86 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC073530.2-201ENST00000623987 261 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms