Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CDY23P-201ENST00000451661 1014 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 RPL5P30-201ENST00000465511 891 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CCDC75P1-201ENST00000469247 791 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC068446.3-201ENST00000555285 382 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC034105.4-201ENST00000568304 277 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 COX6CP4-201ENST00000605798 228 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC015922.4-201ENST00000612568 690 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC090506.2-201ENST00000624521 419 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AC009313.2-201ENST00000417893 1941 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP130-201ENST00000364431 114 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 FCF1P5-201ENST00000406490 482 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 BTF3P10-201ENST00000433415 495 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AL356276.2-201ENST00000435919 558 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 RPL7P22-201ENST00000466005 733 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP497-201ENST00000516081 97 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC091178.1-203ENST00000584586 279 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC010201.1-201ENST00000605051 540 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC007620.3-201ENST00000608131 497 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC117490.2-201ENST00000610042 594 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 MIR8059-201ENST00000620427 81 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 FP325313.1-201ENST00000638228 703 ntBASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHROOM1Q2M3G4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.09□□□□□ -1.6
SHROOM1Q2M3G4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.09□□□□□ -1.6
SHROOM1Q2M3G4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.09□□□□□ -1.6
SHROOM1Q2M3G4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AL592437.2-201ENST00000421655 2434 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC069277.2-201ENST00000454211 432 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC021205.1-201ENST00000468797 348 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC022336.1-201ENST00000475510 337 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 OR52A4P-203ENST00000498233 1014 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 RPS27AP13-201ENST00000498403 237 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC074050.1-201ENST00000563247 211 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 SNX6P1-201ENST00000601728 1224 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC008013.2-202ENST00000637965 364 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 A2MP1-204ENST00000566278 4130 ntBASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM1Q2M3G4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 RNU1-14P-201ENST00000362759 152 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL117339.2-201ENST00000430475 180 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 COX6B1P7-201ENST00000430845 235 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 MRPL48P1-201ENST00000445390 636 ntBASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM1Q2M3G4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms