Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AL357752.1-201ENST00000412817 349 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 PIGFP2-201ENST00000421400 651 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.1□□□□□ -1.11
BRPF1P55201 HMGB1P31-201ENST00000437242 427 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 RPL7P11-201ENST00000437586 658 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 CEACAMP9-201ENST00000442990 513 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
BRPF1P55201 AC092967.1-201ENST00000449016 481 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 RPS27AP3-201ENST00000453803 454 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 TRBV26-201ENST00000456572 344 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 RN7SL326P-201ENST00000477493 296 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC006539.1-201ENST00000481419 501 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 TMEM251P1-201ENST00000503717 318 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 SAP18P1-201ENST00000512058 390 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AP001646.1-201ENST00000527936 915 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 CENPUP2-201ENST00000555897 1186 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC8.1□□□□□ -1.11
BRPF1P55201 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.1□□□□□ -1.11
BRPF1P55201 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.1□□□□□ -1.11
BRPF1P55201 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.1□□□□□ -1.11
BRPF1P55201 AL589863.1-201ENST00000595383 631 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC245014.2-201ENST00000603689 287 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC246785.4-201ENST00000605374 287 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.1□□□□□ -1.11
BRPF1P55201 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC8.1□□□□□ -1.11
BRPF1P55201 AL122023.1-201ENST00000622847 530 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC022140.2-201ENST00000623500 188 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.1□□□□□ -1.11
BRPF1P55201 FAM157B-203ENST00000639350 358 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 AC079776.5-201ENST00000641920 211 ntBASIC8.1□□□□□ -1.11
BRPF1P55201 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
BRPF1P55201 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
BRPF1P55201 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.1□□□□□ -1.11
BRPF1P55201 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
BRPF1P55201 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
BRPF1P55201 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
BRPF1P55201 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.1□□□□□ -1.11
BRPF1P55201 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
BRPF1P55201 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
BRPF1P55201 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.09□□□□□ -1.11
BRPF1P55201 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
BRPF1P55201 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
BRPF1P55201 SNORD8-201ENST00000363915 110 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 RNA5SP478-201ENST00000364657 115 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 RNY4P34-201ENST00000364779 95 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 Y_RNA.303-201ENST00000364998 94 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 MIR188-201ENST00000385034 86 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 PEX12P1-201ENST00000400284 1048 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 RNU4-55P-201ENST00000410731 137 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 TPMTP2-201ENST00000414372 726 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 Z93019.1-201ENST00000416450 973 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AL139413.1-201ENST00000421309 217 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 TRIM60P10Y-201ENST00000425589 751 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 TRAPPC2P5-201ENST00000426293 308 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AC127526.2-201ENST00000426436 775 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 RPS27AP6-201ENST00000427962 448 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 IGLV3-4-201ENST00000432300 244 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 FTLP19-201ENST00000433300 394 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 TRIM60P8Y-201ENST00000436338 762 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 LDHAP2-201ENST00000437325 985 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AMYP1-201ENST00000440059 1023 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AL662791.1-201ENST00000441992 928 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 COX4I1P2-201ENST00000447446 547 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 MTCO1P42-201ENST00000457379 726 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AC124945.1-201ENST00000485133 188 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 GM2AP2-201ENST00000491764 562 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC010343.2-201ENST00000510162 224 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AC034159.1-201ENST00000513885 583 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 RNU6-1003P-201ENST00000517099 105 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC036111.2-201ENST00000533247 901 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC008521.2-201ENST00000591021 259 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 BNIP3P33-201ENST00000598912 569 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 DUXAP4-201ENST00000603046 613 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AP000907.4-201ENST00000604143 237 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AC091965.4-201ENST00000607691 587 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC002553.4-201ENST00000616896 331 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.09□□□□□ -1.11
BRPF1P55201 AC019072.1-201ENST00000604535 1551 ntBASIC8.09□□□□□ -1.11
BRPF1P55201 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.09□□□□□ -1.11
BRPF1P55201 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
BRPF1P55201 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
BRPF1P55201 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.08□□□□□ -1.12
BRPF1P55201 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
BRPF1P55201 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
BRPF1P55201 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms