Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.43□□□□□ -1.7
CENPFP49454 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CENPFP49454 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CENPFP49454 CCAT2-201ENST00000630920 1752 ntBASIC4.43□□□□□ -1.7
CENPFP49454 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.43□□□□□ -1.7
CENPFP49454 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.43□□□□□ -1.7
CENPFP49454 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.43□□□□□ -1.7
CENPFP49454 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.43□□□□□ -1.7
CENPFP49454 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.43□□□□□ -1.7
CENPFP49454 NPM1P47-201ENST00000560843 856 ntBASIC4.43□□□□□ -1.7
CENPFP49454 BDH2P1-201ENST00000602288 736 ntBASIC4.43□□□□□ -1.7
CENPFP49454 QTRT1P1-201ENST00000604344 1078 ntBASIC4.43□□□□□ -1.7
CENPFP49454 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CENPFP49454 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
CENPFP49454 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CENPFP49454 NACA3P-201ENST00000359690 648 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 AC083863.1-201ENST00000438811 231 ntBASIC4.42□□□□□ -1.7
CENPFP49454 RN7SL809P-201ENST00000482040 297 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 AC005520.3-201ENST00000602874 370 ntBASIC4.42□□□□□ -1.7
CENPFP49454 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.42□□□□□ -1.7
CENPFP49454 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CENPFP49454 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.42□□□□□ -1.7
CENPFP49454 AC012158.1-204ENST00000483430 465 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.42□□□□□ -1.7
CENPFP49454 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 AJ239321.1-201ENST00000424255 564 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.42□□□□□ -1.7
CENPFP49454 MRPL35P4-201ENST00000453682 566 ntBASIC4.42□□□□□ -1.7
CENPFP49454 RPL23AP12-201ENST00000467573 473 ntBASIC4.42□□□□□ -1.7
CENPFP49454 AGGF1P3-201ENST00000493675 1213 ntBASIC4.42□□□□□ -1.7
CENPFP49454 RPL5P23-201ENST00000496040 868 ntBASIC4.42□□□□□ -1.7
CENPFP49454 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.42□□□□□ -1.7
CENPFP49454 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CENPFP49454 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CENPFP49454 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CENPFP49454 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 RNA5SP120-201ENST00000410900 112 ntBASIC4.41□□□□□ -1.7
CENPFP49454 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.41□□□□□ -1.7
CENPFP49454 CYCSP24-201ENST00000445119 316 ntBASIC4.41□□□□□ -1.7
CENPFP49454 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.41□□□□□ -1.7
CENPFP49454 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.41□□□□□ -1.7
CENPFP49454 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.41□□□□□ -1.7
CENPFP49454 AL022393.1-201ENST00000625142 1677 ntBASIC4.41□□□□□ -1.7
CENPFP49454 AL592182.3-201ENST00000642132 3304 ntBASIC4.41□□□□□ -1.7
CENPFP49454 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CENPFP49454 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CENPFP49454 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CENPFP49454 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.41□□□□□ -1.7
CENPFP49454 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.41□□□□□ -1.7
CENPFP49454 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CENPFP49454 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPFP49454 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.4□□□□□ -1.7
CENPFP49454 AC005726.1-201ENST00000494679 427 ntBASIC4.4□□□□□ -1.7
CENPFP49454 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.4□□□□□ -1.7
CENPFP49454 AC125494.3-201ENST00000602759 455 ntBASIC4.4□□□□□ -1.7
CENPFP49454 AC013412.1-201ENST00000610687 192 ntBASIC4.4□□□□□ -1.7
CENPFP49454 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.4□□□□□ -1.7
CENPFP49454 MIR7112-201ENST00000616126 65 ntBASIC4.4□□□□□ -1.7
CENPFP49454 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPFP49454 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CENPFP49454 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CENPFP49454 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
CENPFP49454 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
CENPFP49454 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.4□□□□□ -1.71
CENPFP49454 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPFP49454 AC005326.1-201ENST00000429197 123 ntBASIC4.4□□□□□ -1.71
CENPFP49454 RPS3AP46-201ENST00000448352 682 ntBASIC4.4□□□□□ -1.71
CENPFP49454 RPS3AP14-201ENST00000483907 780 ntBASIC4.4□□□□□ -1.71
CENPFP49454 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPFP49454 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CENPFP49454 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CENPFP49454 AC015813.6-201ENST00000624409 5808 ntBASIC4.4□□□□□ -1.71
CENPFP49454 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms