Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 KARSP3-201ENST00000571212 1504 ntBASIC5.32□□□□□ -1.56
CIITAP33076 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.32□□□□□ -1.56
CIITAP33076 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CIITAP33076 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CIITAP33076 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.32□□□□□ -1.56
CIITAP33076 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.32□□□□□ -1.56
CIITAP33076 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 AL359922.3-201ENST00000624779 1670 ntBASIC5.31□□□□□ -1.56
CIITAP33076 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 AL445487.1-201ENST00000415694 1580 ntBASIC5.31□□□□□ -1.56
CIITAP33076 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 MIR192-201ENST00000384915 110 ntBASIC5.31□□□□□ -1.56
CIITAP33076 RNA5SP397-201ENST00000391323 118 ntBASIC5.31□□□□□ -1.56
CIITAP33076 RNA5SP498-201ENST00000411342 120 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.31□□□□□ -1.56
CIITAP33076 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.31□□□□□ -1.56
CIITAP33076 RPS7P2-201ENST00000435134 607 ntBASIC5.31□□□□□ -1.56
CIITAP33076 NMNAT1P2-201ENST00000435192 860 ntBASIC5.31□□□□□ -1.56
CIITAP33076 MTND1P33-201ENST00000446251 917 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC104651.2-201ENST00000447549 528 ntBASIC5.31□□□□□ -1.56
CIITAP33076 MTND1P31-201ENST00000449206 961 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AL591623.2-201ENST00000449978 222 ntBASIC5.31□□□□□ -1.56
CIITAP33076 CEACAMP6-201ENST00000452007 574 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC090142.1-201ENST00000465776 462 ntBASIC5.31□□□□□ -1.56
CIITAP33076 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC008427.1-201ENST00000503102 655 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.31□□□□□ -1.56
CIITAP33076 HMGB3P16-201ENST00000508037 287 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.31□□□□□ -1.56
CIITAP33076 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.31□□□□□ -1.56
CIITAP33076 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.31□□□□□ -1.56
CIITAP33076 AC104785.1-201ENST00000603220 588 ntBASIC5.31□□□□□ -1.56
CIITAP33076 RNU6-1192P-201ENST00000612197 107 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC009159.2-201ENST00000617603 606 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AL121890.2-201ENST00000617644 465 ntBASIC5.31□□□□□ -1.56
CIITAP33076 RNU6-489P-201ENST00000618289 107 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AP001005.3-201ENST00000622049 129 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC015804.1-201ENST00000622935 435 ntBASIC5.31□□□□□ -1.56
CIITAP33076 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.31□□□□□ -1.56
CIITAP33076 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CIITAP33076 AL672167.1-204ENST00000641875 3017 ntBASIC5.31□□□□□ -1.56
CIITAP33076 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.31□□□□□ -1.56
CIITAP33076 AC005332.5-201ENST00000591222 2919 ntBASIC5.3□□□□□ -1.56
CIITAP33076 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.3□□□□□ -1.56
CIITAP33076 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CIITAP33076 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 AL731532.2-201ENST00000623542 1953 ntBASIC5.3□□□□□ -1.56
CIITAP33076 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CIITAP33076 RN7SKP74-201ENST00000362849 309 ntBASIC5.3□□□□□ -1.56
CIITAP33076 RNU5B-4P-201ENST00000363508 111 ntBASIC5.3□□□□□ -1.56
CIITAP33076 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 RN7SKP106-201ENST00000410832 272 ntBASIC5.3□□□□□ -1.56
CIITAP33076 SETP15-201ENST00000412724 337 ntBASIC5.3□□□□□ -1.56
CIITAP33076 TATDN1P1-201ENST00000414123 891 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 PTP4A1P7-201ENST00000423476 514 ntBASIC5.3□□□□□ -1.56
CIITAP33076 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 ELOCP11-201ENST00000436690 332 ntBASIC5.3□□□□□ -1.56
CIITAP33076 MED6P1-201ENST00000439659 713 ntBASIC5.3□□□□□ -1.56
CIITAP33076 ELOCP16-201ENST00000444494 332 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AC012512.1-201ENST00000446594 718 ntBASIC5.3□□□□□ -1.56
CIITAP33076 MTND2P8-201ENST00000450555 1025 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 RPS29P33-201ENST00000456717 146 ntBASIC5.3□□□□□ -1.56
CIITAP33076 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 AC020699.1-201ENST00000505161 445 ntBASIC5.3□□□□□ -1.56
CIITAP33076 HPRT1P1-201ENST00000509498 657 ntBASIC5.3□□□□□ -1.56
CIITAP33076 RNA5SP303-201ENST00000516192 130 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.3□□□□□ -1.56
CIITAP33076 AC021483.2-201ENST00000567415 758 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms