Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC073264.1-201ENST00000411508 416 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AL596448.1-201ENST00000415024 392 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AL022324.2-201ENST00000434827 780 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 MTND3P2-201ENST00000438452 342 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AL034369.1-201ENST00000453808 477 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 SNX18P26-201ENST00000458433 740 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC083798.1-201ENST00000472671 131 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 RN7SL413P-201ENST00000482700 297 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC023194.1-201ENST00000493084 308 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC018645.1-201ENST00000505003 109 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AP005639.1-201ENST00000526939 192 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 OR8A2P-201ENST00000528631 952 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 NANOGNBP2-201ENST00000544753 553 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 HMGN1P26-201ENST00000558737 303 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 TPMTP1-201ENST00000592307 737 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.53□□□□□ -1.36
NFKB1P19838 AC104785.1-201ENST00000603220 588 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC124312.5-201ENST00000604451 268 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AL390877.1-201ENST00000605704 214 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 TPTEP1-208ENST00000636884 213 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 AC010401.2-201ENST00000575137 4934 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NFKB1P19838 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.53□□□□□ -1.36
NFKB1P19838 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.53□□□□□ -1.36
NFKB1P19838 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.53□□□□□ -1.36
NFKB1P19838 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NFKB1P19838 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
NFKB1P19838 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
NFKB1P19838 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.52□□□□□ -1.36
NFKB1P19838 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NFKB1P19838 SMG1P5-202ENST00000529428 4219 ntBASIC6.52□□□□□ -1.36
NFKB1P19838 SMG1P2-201ENST00000566127 4221 ntBASIC6.52□□□□□ -1.36
NFKB1P19838 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC006600.2-201ENST00000624834 2506 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 SNRPEP3-201ENST00000338402 276 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NFKB1P19838 OR52E6-202ENST00000379946 954 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 RNU6-769P-201ENST00000384407 104 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 RN7SKP266-201ENST00000410232 287 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 RPS7P15-201ENST00000415804 584 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AL592293.2-201ENST00000422292 996 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 MTCO2P5-201ENST00000422621 426 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 MTCO3P46-201ENST00000425787 232 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.52□□□□□ -1.37
NFKB1P19838 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 BRK1P2-201ENST00000442875 223 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 RPL7P12-201ENST00000446719 750 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AP003385.3-201ENST00000472498 287 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.52□□□□□ -1.37
NFKB1P19838 RNU6-835P-201ENST00000516974 104 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.52□□□□□ -1.37
NFKB1P19838 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC093012.1-202ENST00000549403 582 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 SUB1P2-201ENST00000556401 297 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.52□□□□□ -1.37
NFKB1P19838 AC073046.2-201ENST00000604756 527 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AL008723.3-201ENST00000608926 449 ntBASIC6.52□□□□□ -1.37
NFKB1P19838 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms