Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 RN7SKP97-201ENST00000410966 333 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL11A1P12107 RPL37P1-201ENST00000432310 284 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AL035246.1-201ENST00000433554 1255 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 AL133372.1-201ENST00000493565 745 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 SCARNA14-201ENST00000516903 136 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.6□□□□□ -1.67
COL11A1P12107 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.6□□□□□ -1.67
COL11A1P12107 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 AC015726.1-201ENST00000602353 681 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.6□□□□□ -1.67
COL11A1P12107 MIR6868-201ENST00000611215 58 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AL357559.1-201ENST00000622228 274 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 AP005264.7-201ENST00000625003 745 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 TCP1P3-201ENST00000414406 1498 ntBASIC4.6□□□□□ -1.67
COL11A1P12107 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
COL11A1P12107 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL11A1P12107 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.59□□□□□ -1.67
COL11A1P12107 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL11A1P12107 AC058791.1-201ENST00000608412 3198 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 AC112198.2-201ENST00000426589 6996 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL11A1P12107 GVINP1-202ENST00000531871 7271 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL11A1P12107 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL11A1P12107 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.59□□□□□ -1.67
COL11A1P12107 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.59□□□□□ -1.67
COL11A1P12107 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.59□□□□□ -1.67
COL11A1P12107 AL139099.1-201ENST00000497398 403 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.59□□□□□ -1.67
COL11A1P12107 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.59□□□□□ -1.67
COL11A1P12107 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.59□□□□□ -1.67
COL11A1P12107 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.59□□□□□ -1.67
COL11A1P12107 RPL21P7-201ENST00000557463 483 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.59□□□□□ -1.67
COL11A1P12107 AC091167.4-201ENST00000605079 184 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.59□□□□□ -1.67
COL11A1P12107 AC138907.10-201ENST00000623708 983 ntBASIC4.59□□□□□ -1.67
COL11A1P12107 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL11A1P12107 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.59□□□□□ -1.68
COL11A1P12107 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 MIR449B-201ENST00000384995 97 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 VN1R8P-201ENST00000407739 893 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC004448.2-201ENST00000422360 586 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC091286.1-201ENST00000431233 461 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A1P12107 GAPDHP36-201ENST00000480688 918 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 RN7SL323P-201ENST00000494712 295 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 CR392039.5-201ENST00000623201 510 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 MARK2P15-201ENST00000432204 2186 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 SNORA60-201ENST00000362396 134 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 RNU6-525P-201ENST00000363685 104 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 SNORA9-201ENST00000384215 133 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 RN7SKP159-201ENST00000410657 292 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A1P12107 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC063950.1-201ENST00000552036 308 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.58□□□□□ -1.68
COL11A1P12107 AC024220.1-201ENST00000603675 484 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC112230.1-201ENST00000604342 547 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC095038.2-201ENST00000621464 1070 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC007342.8-201ENST00000623278 678 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 AC015908.5-201ENST00000623289 343 ntBASIC4.58□□□□□ -1.68
COL11A1P12107 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A1P12107 SAMMSON-213ENST00000641336 1521 ntBASIC4.57□□□□□ -1.68
COL11A1P12107 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms