Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 RPL23AP89-201ENST00000439324 255 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 AC006326.1-201ENST00000445465 787 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 RPS20P4-201ENST00000461659 355 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 RPS29P19-201ENST00000479709 171 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 RPS27AP13-201ENST00000498403 237 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.73□□□□□ -1.81
FREM3P0C091 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.73□□□□□ -1.81
FREM3P0C091 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AC019278.1-201ENST00000623516 479 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AP000756.2-201ENST00000624168 2567 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.72□□□□□ -1.81
FREM3P0C091 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
FREM3P0C091 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FREM3P0C091 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
FREM3P0C091 AL132656.3-201ENST00000606384 1595 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
FREM3P0C091 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FREM3P0C091 RPL32P23-201ENST00000397237 405 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.72□□□□□ -1.81
FREM3P0C091 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.72□□□□□ -1.81
FREM3P0C091 RPL6P21-201ENST00000418672 846 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.72□□□□□ -1.81
FREM3P0C091 EIF2S2P5-201ENST00000457635 968 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 RPS7P7-201ENST00000463499 571 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 AC139783.2-201ENST00000504847 1145 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.72□□□□□ -1.81
FREM3P0C091 AC006064.5-201ENST00000541782 248 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.72□□□□□ -1.81
FREM3P0C091 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 RLIMP1-201ENST00000339626 1680 ntBASIC3.72□□□□□ -1.81
FREM3P0C091 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FREM3P0C091 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FREM3P0C091 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FREM3P0C091 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
FREM3P0C091 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.81
FREM3P0C091 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
FREM3P0C091 AC025750.1-201ENST00000399891 379 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.71□□□□□ -1.81
FREM3P0C091 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.71□□□□□ -1.81
FREM3P0C091 YY1P1-201ENST00000427625 668 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.71□□□□□ -1.81
FREM3P0C091 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.71□□□□□ -1.81
FREM3P0C091 CDC27P1-201ENST00000445384 715 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.71□□□□□ -1.81
FREM3P0C091 AC069240.1-201ENST00000548774 375 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 AC107982.3-201ENST00000584957 985 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 AC064801.1-201ENST00000612025 407 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 AC095038.2-201ENST00000621464 1070 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 CDRT1-208ENST00000630868 794 ntBASIC3.71□□□□□ -1.81
FREM3P0C091 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
FREM3P0C091 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
FREM3P0C091 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FREM3P0C091 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.71□□□□□ -1.82
FREM3P0C091 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
FREM3P0C091 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.71□□□□□ -1.82
FREM3P0C091 AL139247.1-201ENST00000422768 325 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 AC010469.1-201ENST00000463864 576 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.71□□□□□ -1.82
FREM3P0C091 AC091959.2-201ENST00000477363 321 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.71□□□□□ -1.82
FREM3P0C091 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.71□□□□□ -1.82
FREM3P0C091 AC090312.1-201ENST00000580637 348 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.71□□□□□ -1.82
FREM3P0C091 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.71□□□□□ -1.82
FREM3P0C091 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.71□□□□□ -1.82
FREM3P0C091 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 TMEM30CP-203ENST00000637814 1035 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 NOL8P1-201ENST00000508336 3529 ntBASIC3.71□□□□□ -1.82
FREM3P0C091 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.71□□□□□ -1.82
FREM3P0C091 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FREM3P0C091 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 AC020633.1-201ENST00000468439 2247 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 RNU1-64P-201ENST00000365443 163 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AMZ2P2-201ENST00000406819 1057 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 RN7SKP156-201ENST00000410308 342 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms