Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 AC021087.2-201ENST00000504656 1203 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 AC074029.2-201ENST00000551045 634 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 ELOCP34-201ENST00000604436 327 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AL160290.3-201ENST00000604869 165 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC007546.2-201ENST00000623996 360 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC011944.2-201ENST00000624440 683 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC119674.1-212ENST00000641155 993 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC119674.1-220ENST00000641502 1048 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CLDN3O15551 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN3O15551 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN3O15551 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 RNU1-44P-201ENST00000384453 163 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC011933.1-201ENST00000413334 321 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC048351.1-201ENST00000420064 602 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 MORF4L1P4-201ENST00000450245 976 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC116533.1-201ENST00000459748 321 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 UBA52P3-201ENST00000491303 382 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 HMGB1P47-201ENST00000511281 589 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC092593.2-201ENST00000513866 913 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AF186190.1-201ENST00000517470 480 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 OR5BC1P-201ENST00000529327 739 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC090515.3-201ENST00000560431 315 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC123786.2-201ENST00000603459 275 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC133552.5-201ENST00000604266 540 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AC073111.2-201ENST00000605657 1075 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 Z98200.1-201ENST00000607298 470 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 AL353726.1-201ENST00000614041 1000 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN3O15551 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 AP003497.2-201ENST00000624220 967 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN3O15551 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
CLDN3O15551 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN3O15551 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLDN3O15551 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN3O15551 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 Z95327.2-201ENST00000414579 1873 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 SNORA62-201ENST00000365493 153 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 AL078604.1-201ENST00000404609 466 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 CHIAP3-201ENST00000423668 1133 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 C4BPAP2-201ENST00000428434 478 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN3O15551 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 AL627224.1-201ENST00000448334 444 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN3O15551 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN3O15551 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN3O15551 FABP5P6-201ENST00000510588 409 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN3O15551 RNU6-491P-201ENST00000516099 110 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 HIGD1AP18-201ENST00000520730 278 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AC021483.2-201ENST00000567415 758 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 ELOCP28-201ENST00000590044 317 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 AC025175.1-201ENST00000606482 759 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AC084036.1-201ENST00000609190 508 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AL391834.1-201ENST00000609609 560 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms