Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RN7SKP148-201ENST00000410179 275 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 MTCO2P27-201ENST00000420740 428 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL356276.2-201ENST00000435919 558 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 MYL6P3-201ENST00000436904 432 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 MTND3P2-201ENST00000438452 342 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 HSPE1P28-201ENST00000443139 211 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 DDX3P2-201ENST00000446138 111 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC002075.1-201ENST00000457396 676 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC106760.2-201ENST00000504159 619 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC021220.1-201ENST00000507445 630 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 DCAF13P2-201ENST00000514188 555 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC090572.1-201ENST00000519251 160 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007537.1-201ENST00000539347 327 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC006116.10-201ENST00000591836 581 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 SIGLEC31P-201ENST00000594237 551 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 FXYD6P1-201ENST00000604857 285 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL161931.1-201ENST00000612768 246 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC131009.3-201ENST00000621809 287 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AC010168.2-201ENST00000562691 5428 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC006020.1-201ENST00000420179 1854 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC105114.1-201ENST00000624795 1862 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC073365.1-203ENST00000641055 1992 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU4-1-201ENST00000363925 141 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNA5SP394-201ENST00000364216 119 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-921P-201ENST00000384361 107 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR137-201ENST00000385223 102 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL591416.1-201ENST00000404015 867 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC127526.1-201ENST00000417526 366 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC006548.1-201ENST00000427470 102 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 PPIAP13-201ENST00000434706 478 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 GTF2IP13-201ENST00000438487 386 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC019185.3-201ENST00000438805 323 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SRP68P2-201ENST00000456184 254 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL356010.1-201ENST00000456364 102 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-329P-201ENST00000459618 107 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC233702.1-201ENST00000482905 502 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL163973.1-201ENST00000484753 577 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL23AP41-201ENST00000484754 458 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL32P9-201ENST00000487963 407 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SKP242-201ENST00000515967 289 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU4-49P-201ENST00000516080 140 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-410P-201ENST00000517006 107 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 OR4T1P-201ENST00000554933 911 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms