Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL049555.1-201ENST00000562834 1933 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 GTF2H2B-203ENST00000508065 1432 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 RN7SKP160-201ENST00000363804 340 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 SNORD115-48-201ENST00000364764 76 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 MIR143-201ENST00000385300 106 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 RNA5SP239-201ENST00000410218 129 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL591848.1-201ENST00000413092 322 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 GJA6P-201ENST00000415117 1042 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL138785.1-201ENST00000425821 331 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OR52B5P-201ENST00000435337 951 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC092905.1-201ENST00000467527 949 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC006511.1-201ENST00000470614 315 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC010683.1-201ENST00000473673 378 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 PFN1P8-201ENST00000497012 543 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC020593.1-201ENST00000507399 299 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC013701.1-201ENST00000522657 465 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OR11J2P-201ENST00000555298 907 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 FKBP1AP1-201ENST00000594588 318 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC023762.1-201ENST00000603280 584 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 SUMO2P14-201ENST00000604488 293 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 MIR6780B-201ENST00000610307 79 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC048341.3-201ENST00000619323 491 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 AC024023.1-201ENST00000624530 922 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 OR52B5P-202ENST00000641118 1110 ntBASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCNIP3Q9Y2W7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC022893.2-201ENST00000564832 3296 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC027287.1-201ENST00000553115 1453 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC083899.2-201ENST00000423285 1376 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RNU1-82P-201ENST00000390851 165 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 OR1F12-201ENST00000402365 945 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ZNF603P-201ENST00000405613 487 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 PPIAP17-201ENST00000438507 471 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 SUMO2P1-206ENST00000445436 284 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 HMGB1P16-201ENST00000447155 540 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 TPMTP4-201ENST00000450749 678 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms