Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC093535.2-201ENST00000624769 2326 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 RNU6-386P-201ENST00000362650 107 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 MIR937-201ENST00000401271 86 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 RNA5SP306-201ENST00000411087 107 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC009302.1-201ENST00000417147 390 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC006065.1-201ENST00000422539 802 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 PRELID3BP10-201ENST00000431957 584 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 RSL24D1P2-201ENST00000445584 366 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 ARL2BPP10-201ENST00000446487 531 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC092905.1-201ENST00000467527 949 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 RN7SL354P-201ENST00000469282 294 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 OR52A4P-201ENST00000472867 958 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 RPL23AP72-201ENST00000492447 435 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 snoU109.6-201ENST00000516831 118 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 IGLVIV-53-201ENST00000520107 367 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC137768.1-201ENST00000549998 553 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC104785.1-201ENST00000603220 588 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC115286.1-201ENST00000604298 434 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 BX323046.1-201ENST00000610145 535 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC009704.2-201ENST00000618739 483 ntBASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
TRAPPC4Q9Y296 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL627171.1-201ENST00000618845 1308 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC053481.2-202ENST00000582394 1500 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RNA5SP307-201ENST00000362863 116 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RNU6-819P-201ENST00000364116 107 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 OR13C3-201ENST00000374781 1108 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RNU1-63P-201ENST00000383902 164 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RNU6-398P-201ENST00000384143 109 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 MIR129-1-201ENST00000384972 72 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 MIR3065-201ENST00000390137 79 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 CYB5AP4-201ENST00000396692 399 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 GLULP6-201ENST00000399502 913 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC016769.2-201ENST00000414815 475 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 ARAFP1-201ENST00000422172 605 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC245028.1-201ENST00000423259 256 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC234779.1-201ENST00000425910 285 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 YY1P1-201ENST00000427625 668 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RPL23AP1-201ENST00000428990 471 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RPL7P4-203ENST00000430239 730 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 RPL12P28-201ENST00000430852 489 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL132765.1-201ENST00000434165 553 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC053481.1-201ENST00000467217 306 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 UBA52P3-201ENST00000491303 382 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC146944.2-203ENST00000502493 354 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AK3P4-201ENST00000504283 583 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC139495.1-202ENST00000513164 354 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC009268.1-201ENST00000561352 1203 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC245128.3-201ENST00000594721 748 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC234771.5-201ENST00000600161 514 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC090181.2-201ENST00000602975 672 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC103792.1-201ENST00000603591 919 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC093765.1-201ENST00000603758 881 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC090953.1-201ENST00000604305 1092 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms