Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AC020593.1-201ENST00000507399 299 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 PARP4P3-201ENST00000510265 317 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 PPBPP1-201ENST00000510807 373 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 SNORA31.9-201ENST00000516429 84 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 RNU4-18P-201ENST00000516751 149 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 KCTD9P6-201ENST00000522306 950 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 RNA5SP196-201ENST00000625967 102 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 AC073869.7-201ENST00000640874 297 ntBASIC5.66□□□□□ -1.5
NPC1L1Q9UHC9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.65□□□□□ -1.5
NPC1L1Q9UHC9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.65□□□□□ -1.5
NPC1L1Q9UHC9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.65□□□□□ -1.5
NPC1L1Q9UHC9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.5
NPC1L1Q9UHC9 A2MP1-204ENST00000566278 4130 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 ATP5F1P2-201ENST00000398143 760 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RNA5SP317-201ENST00000410176 116 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RNA5SP311-201ENST00000411290 116 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 MRPL50P1-201ENST00000431951 384 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RPL23AP89-201ENST00000439324 255 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 SNORA84-201ENST00000459229 133 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 MTCO3P42-201ENST00000509488 518 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 MTCO3P39-201ENST00000514812 518 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RNA5SP315-201ENST00000516340 116 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 RNA5SP312-201ENST00000517068 116 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 MTND1P6-201ENST00000523621 946 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 OR10D4P-201ENST00000525892 951 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 OR5M7P-201ENST00000526140 972 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 MED28P5-201ENST00000528254 438 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AL121834.1-201ENST00000572284 509 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AP001542.1-201ENST00000591314 200 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AL591034.3-201ENST00000605511 685 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC015922.4-201ENST00000612568 690 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC090506.2-201ENST00000624521 419 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 AC010608.2-201ENST00000624830 470 ntBASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPC1L1Q9UHC9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 ENSAP1-201ENST00000392855 326 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AL607077.1-201ENST00000401718 499 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AL022722.2-201ENST00000402519 180 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AL445213.1-201ENST00000412589 747 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 RPL36AP36-201ENST00000418616 301 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 UBE2V2P1-201ENST00000434717 398 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC006011.1-201ENST00000442758 349 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC006517.1-201ENST00000480485 328 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 TVP23BP1-201ENST00000557500 617 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC234775.3-201ENST00000564612 656 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 MIR5684-201ENST00000585074 65 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 AC090948.2-201ENST00000607363 564 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 MAPK10-320ENST00000641462 6696 ntBASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPC1L1Q9UHC9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 DDX18P6-201ENST00000450119 1997 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms