Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BCAS3Q9H6U6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL121657.1-201ENST00000327215 531 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 RN7SKP185-201ENST00000362813 326 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 MGAT2P2-201ENST00000427194 797 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL138787.1-202ENST00000437804 898 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC092170.1-201ENST00000440211 356 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC009263.1-201ENST00000441193 1239 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL035407.2-201ENST00000454090 378 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL389915.2-201ENST00000454576 441 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 SNORD125-201ENST00000459538 96 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 PSAT1P4-201ENST00000466500 526 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC147055.4-201ENST00000504399 745 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL139174.1-201ENST00000531489 886 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL121839.1-201ENST00000556233 1185 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL390726.5-202ENST00000564800 256 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC008507.1-201ENST00000587506 734 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC068020.1-201ENST00000594215 661 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC130352.1-201ENST00000602979 661 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LARP7P1-201ENST00000605576 316 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC007684.1-201ENST00000609671 477 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC024023.1-201ENST00000624530 922 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC01739-205ENST00000641890 573 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AP005901.5-201ENST00000545779 1796 ntBASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.05□□□□□ -1.44
BCAS3Q9H6U6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC005539.1-201ENST00000443768 1479 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RNA5SP507-201ENST00000363603 121 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RNU4-91P-201ENST00000364778 135 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 Y_RNA.359-201ENST00000365498 102 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC093719.1-202ENST00000392735 373 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC007068.1-201ENST00000396690 844 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 MTCO3P31-201ENST00000405526 789 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RPS3AP24-201ENST00000407896 734 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RN7SKP33-201ENST00000410942 340 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RPS27AP7-201ENST00000422792 455 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RIMKLBP2-201ENST00000424737 654 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RPL21P43-201ENST00000425440 472 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC010975.2-201ENST00000427781 588 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC097499.1-201ENST00000444277 208 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AL671855.1-201ENST00000446875 1203 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AL672138.1-201ENST00000450604 1015 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC083899.1-201ENST00000454465 3819 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RPL5P13-201ENST00000462840 709 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 MTCO3P38-201ENST00000468910 766 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 RPL7AP6-201ENST00000477943 801 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 MYL12BP2-201ENST00000503948 512 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC079395.1-201ENST00000510981 262 ntBASIC6.04□□□□□ -1.44
BCAS3Q9H6U6 AC008837.2-201ENST00000513076 418 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms